Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.51■□□□□ 0.23
SHISA3A0PJX4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 AC005829.2-201ENST00000571422 1056 ntBASIC16.5■□□□□ 0.23
SHISA3A0PJX4 AC005181.1-201ENST00000604782 1256 ntBASIC16.5■□□□□ 0.23
SHISA3A0PJX4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 AC080080.1-201ENST00000625121 2420 ntBASIC16.5■□□□□ 0.23
SHISA3A0PJX4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 AP006587.1-201ENST00000534129 1502 ntBASIC16.5■□□□□ 0.23
SHISA3A0PJX4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHISA3A0PJX4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.49■□□□□ 0.23
SHISA3A0PJX4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 AL512625.2-201ENST00000417533 625 ntBASIC16.49■□□□□ 0.23
SHISA3A0PJX4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SHISA3A0PJX4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms