Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGHV4-28A0A0C4DH34 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 MIR1224-201ENST00000408193 85 ntBASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 AP003041.3-201ENST00000527151 707 ntBASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV4-28A0A0C4DH34 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.66□□□□□ -0.22
IGHV4-28A0A0C4DH34 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms