Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 MIR3180-5-201ENST00000583743 153 ntBASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 AC091076.1-201ENST00000610741 619 ntBASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.99■□□□□ 0.31
TRGV5A0A0B4J1U4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 AC036111.1-201ENST00000533973 1582 ntBASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 AL671277.2-201ENST00000458060 996 ntBASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 AL358472.4-201ENST00000633140 710 ntBASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.98■□□□□ 0.31
TRGV5A0A0B4J1U4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 AL121956.5-201ENST00000625261 221 ntBASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRGV5A0A0B4J1U4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRGV5A0A0B4J1U4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TRGV5A0A0B4J1U4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.96■□□□□ 0.31
TRGV5A0A0B4J1U4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRGV5A0A0B4J1U4 FEM1AP3-201ENST00000403722 1741 ntBASIC16.96■□□□□ 0.31
TRGV5A0A0B4J1U4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRGV5A0A0B4J1U4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.96■□□□□ 0.31
TRGV5A0A0B4J1U4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.96■□□□□ 0.31
TRGV5A0A0B4J1U4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRGV5A0A0B4J1U4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms