Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 AL390961.4-201ENST00000623958 2535 ntBASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 UNC93B5-201ENST00000530315 699 ntBASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-3A0A0A6YYJ7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms