Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 SOX15-203ENST00000570788 1093 ntBASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 AC008687.6-201ENST00000596318 630 ntBASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 AC083880.1-201ENST00000608266 535 ntBASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 AC008764.6-201ENST00000595909 2069 ntBASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-7A0A0A0MS04 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRBV6-7A0A0A0MS04 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRBV6-7A0A0A0MS04 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.83■□□□□ 0.13
TRBV6-7A0A0A0MS04 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.83■□□□□ 0.13
TRBV6-7A0A0A0MS04 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRBV6-7A0A0A0MS04 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRBV6-7A0A0A0MS04 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRBV6-7A0A0A0MS04 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRBV6-7A0A0A0MS04 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRBV6-7A0A0A0MS04 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
TRBV6-7A0A0A0MS04 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.83■□□□□ 0.13
TRBV6-7A0A0A0MS04 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
TRBV6-7A0A0A0MS04 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.83■□□□□ 0.12
TRBV6-7A0A0A0MS04 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.83■□□□□ 0.12
TRBV6-7A0A0A0MS04 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.83■□□□□ 0.12
TRBV6-7A0A0A0MS04 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.83■□□□□ 0.12
TRBV6-7A0A0A0MS04 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.83■□□□□ 0.12
TRBV6-7A0A0A0MS04 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.83■□□□□ 0.12
TRBV6-7A0A0A0MS04 AC083906.6-201ENST00000641366 219 ntBASIC15.83■□□□□ 0.12
TRBV6-7A0A0A0MS04 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRBV6-7A0A0A0MS04 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRBV6-7A0A0A0MS04 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.83■□□□□ 0.12
TRBV6-7A0A0A0MS04 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-7A0A0A0MS04 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-7A0A0A0MS04 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.83■□□□□ 0.12
TRBV6-7A0A0A0MS04 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-7A0A0A0MS04 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-7A0A0A0MS04 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
TRBV6-7A0A0A0MS04 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV6-7A0A0A0MS04 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms