Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 RNA5SP443-201ENST00000363083 132 ntBASIC6.31□□□□□ -1.4
NCBP3Q53F19 RNU1-105P-201ENST00000363470 161 ntBASIC6.31□□□□□ -1.4
NCBP3Q53F19 RNU6-1229P-201ENST00000364295 107 ntBASIC6.31□□□□□ -1.4
NCBP3Q53F19 AL161788.1-201ENST00000441805 169 ntBASIC6.31□□□□□ -1.4
NCBP3Q53F19 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NCBP3Q53F19 AC105129.1-201ENST00000560250 297 ntBASIC6.31□□□□□ -1.4
NCBP3Q53F19 ZNF861P-201ENST00000588126 639 ntBASIC6.31□□□□□ -1.4
NCBP3Q53F19 MIR8069-1-201ENST00000616627 86 ntBASIC6.31□□□□□ -1.4
NCBP3Q53F19 MIR8069-2-201ENST00000621412 86 ntBASIC6.31□□□□□ -1.4
NCBP3Q53F19 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NCBP3Q53F19 MIR338-201ENST00000636369 67 ntBASIC6.31□□□□□ -1.4
NCBP3Q53F19 U6.98-201ENST00000637157 84 ntBASIC6.31□□□□□ -1.4
NCBP3Q53F19 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NCBP3Q53F19 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NCBP3Q53F19 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NCBP3Q53F19 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC6.31□□□□□ -1.4
NCBP3Q53F19 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC6.31□□□□□ -1.4
NCBP3Q53F19 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.31□□□□□ -1.4
NCBP3Q53F19 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NCBP3Q53F19 SDAD1P1-202ENST00000524156 2051 ntBASIC6.3□□□□□ -1.4
NCBP3Q53F19 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
NCBP3Q53F19 RNU6-1313P-201ENST00000362622 102 ntBASIC6.3□□□□□ -1.4
NCBP3Q53F19 AC009969.1-201ENST00000438726 172 ntBASIC6.3□□□□□ -1.4
NCBP3Q53F19 AL031183.1-201ENST00000457667 207 ntBASIC6.3□□□□□ -1.4
NCBP3Q53F19 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC6.3□□□□□ -1.4
NCBP3Q53F19 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.3□□□□□ -1.4
NCBP3Q53F19 RNU6-86P-201ENST00000606534 107 ntBASIC6.3□□□□□ -1.4
NCBP3Q53F19 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NCBP3Q53F19 AC092881.1-201ENST00000638218 2733 ntBASIC6.3□□□□□ -1.4
NCBP3Q53F19 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NCBP3Q53F19 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NCBP3Q53F19 SNORA8-201ENST00000384574 139 ntBASIC6.29□□□□□ -1.4
NCBP3Q53F19 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NCBP3Q53F19 AC069257.2-201ENST00000441819 155 ntBASIC6.29□□□□□ -1.4
NCBP3Q53F19 RNU7-96P-201ENST00000459535 64 ntBASIC6.29□□□□□ -1.4
NCBP3Q53F19 AC108729.3-201ENST00000513484 108 ntBASIC6.29□□□□□ -1.4
NCBP3Q53F19 SCARNA17.1-201ENST00000516211 143 ntBASIC6.29□□□□□ -1.4
NCBP3Q53F19 SCARNA17.2-201ENST00000516334 143 ntBASIC6.29□□□□□ -1.4
NCBP3Q53F19 SNORD59.2-201ENST00000516873 68 ntBASIC6.29□□□□□ -1.4
NCBP3Q53F19 SCARNA17.4-201ENST00000614296 143 ntBASIC6.29□□□□□ -1.4
NCBP3Q53F19 XIST_intron.1-201ENST00000619444 68 ntBASIC6.29□□□□□ -1.4
NCBP3Q53F19 AC140479.6-201ENST00000633535 357 ntBASIC6.29□□□□□ -1.4
NCBP3Q53F19 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NCBP3Q53F19 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NCBP3Q53F19 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.28□□□□□ -1.4
NCBP3Q53F19 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NCBP3Q53F19 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NCBP3Q53F19 BCLAF1P1-201ENST00000505813 2752 ntBASIC6.28□□□□□ -1.4
NCBP3Q53F19 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NCBP3Q53F19 RAB6C-AS1-202ENST00000433431 123 ntBASIC6.28□□□□□ -1.4
NCBP3Q53F19 GOT2P5-201ENST00000433995 546 ntBASIC6.28□□□□□ -1.4
NCBP3Q53F19 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC6.28□□□□□ -1.4
NCBP3Q53F19 RNU7-94P-201ENST00000459576 63 ntBASIC6.28□□□□□ -1.4
NCBP3Q53F19 MIR4644-201ENST00000579929 84 ntBASIC6.28□□□□□ -1.4
NCBP3Q53F19 MIR6820-201ENST00000611508 62 ntBASIC6.28□□□□□ -1.4
NCBP3Q53F19 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NCBP3Q53F19 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC6.28□□□□□ -1.4
NCBP3Q53F19 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
NCBP3Q53F19 AC005336.3-201ENST00000623833 2679 ntBASIC6.28□□□□□ -1.4
NCBP3Q53F19 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.27□□□□□ -1.4
NCBP3Q53F19 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC6.27□□□□□ -1.41
NCBP3Q53F19 RNU7-45P-201ENST00000459460 63 ntBASIC6.27□□□□□ -1.41
NCBP3Q53F19 RNU6-1258P-201ENST00000516911 111 ntBASIC6.27□□□□□ -1.41
NCBP3Q53F19 AC093249.4-201ENST00000564755 259 ntBASIC6.27□□□□□ -1.41
NCBP3Q53F19 MIR548AE2-201ENST00000583456 67 ntBASIC6.27□□□□□ -1.41
NCBP3Q53F19 HNRNPDLP4-201ENST00000605144 301 ntBASIC6.27□□□□□ -1.41
NCBP3Q53F19 AC145423.2-201ENST00000610631 239 ntBASIC6.27□□□□□ -1.41
NCBP3Q53F19 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.27□□□□□ -1.41
NCBP3Q53F19 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
NCBP3Q53F19 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC6.26□□□□□ -1.41
NCBP3Q53F19 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
NCBP3Q53F19 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NCBP3Q53F19 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
NCBP3Q53F19 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.26□□□□□ -1.41
NCBP3Q53F19 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
NCBP3Q53F19 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NCBP3Q53F19 AC017083.1-201ENST00000428093 483 ntBASIC6.26□□□□□ -1.41
NCBP3Q53F19 RNA5SP33-201ENST00000516687 98 ntBASIC6.26□□□□□ -1.41
NCBP3Q53F19 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NCBP3Q53F19 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC6.26□□□□□ -1.41
NCBP3Q53F19 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NCBP3Q53F19 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NCBP3Q53F19 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6.25□□□□□ -1.41
NCBP3Q53F19 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC6.25□□□□□ -1.41
NCBP3Q53F19 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
NCBP3Q53F19 AC090844.1-201ENST00000422019 156 ntBASIC6.25□□□□□ -1.41
NCBP3Q53F19 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC6.25□□□□□ -1.41
NCBP3Q53F19 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC6.25□□□□□ -1.41
NCBP3Q53F19 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
NCBP3Q53F19 SPATA31D2P-201ENST00000429999 4388 ntBASIC6.24□□□□□ -1.41
NCBP3Q53F19 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
NCBP3Q53F19 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NCBP3Q53F19 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NCBP3Q53F19 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NCBP3Q53F19 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC6.24□□□□□ -1.41
NCBP3Q53F19 RNU1-83P-201ENST00000363426 164 ntBASIC6.24□□□□□ -1.41
NCBP3Q53F19 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC6.24□□□□□ -1.41
NCBP3Q53F19 AC006466.1-201ENST00000438721 289 ntBASIC6.24□□□□□ -1.41
NCBP3Q53F19 RPS12P2-201ENST00000439728 269 ntBASIC6.24□□□□□ -1.41
NCBP3Q53F19 RN7SL271P-201ENST00000487601 295 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms