Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.73□□□□□ -1.65
PDZRN3Q9UPQ7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 AF228730.3-201ENST00000436691 102 ntBASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 AL353689.1-201ENST00000438895 199 ntBASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 RPS20P22-201ENST00000473700 357 ntBASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 RPL30P5-201ENST00000494923 336 ntBASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 RNU6-1299P-201ENST00000516316 100 ntBASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 AC022695.1-201ENST00000522089 237 ntBASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 CYCSP39-201ENST00000565821 309 ntBASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 AC022254.1-201ENST00000567857 235 ntBASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 MIR5588-201ENST00000581890 63 ntBASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 AC007229.1-201ENST00000590455 412 ntBASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 AL356575.1-201ENST00000603008 283 ntBASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 SNORA62.6-201ENST00000606322 83 ntBASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 AL021707.8-201ENST00000609428 183 ntBASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 AC012531.5-201ENST00000611375 151 ntBASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 AL359198.2-201ENST00000611836 194 ntBASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PDZRN3Q9UPQ7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
PDZRN3Q9UPQ7 AL035425.3-201ENST00000564206 4996 ntBASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 SNORA31-201ENST00000362607 130 ntBASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 SNORD56.1-201ENST00000362913 68 ntBASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 RNU6-675P-201ENST00000384236 104 ntBASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 MIR544A-201ENST00000384855 91 ntBASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 SNORA26.3-201ENST00000391119 136 ntBASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 MIR1183-201ENST00000408856 89 ntBASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 AC005300.1-201ENST00000428401 373 ntBASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 NDUFB1P1-201ENST00000435191 180 ntBASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 RNU7-171P-201ENST00000459581 62 ntBASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 MIR7851-201ENST00000610611 160 ntBASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDZRN3Q9UPQ7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 SNORA4.2-201ENST00000365313 147 ntBASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 SNORD6-201ENST00000365444 73 ntBASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 RNA5SP496-201ENST00000391240 109 ntBASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 AC078809.1-201ENST00000427601 140 ntBASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 SNORA70.12-201ENST00000516084 153 ntBASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 RNA5SP236-201ENST00000516169 116 ntBASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 RNA5SP153-201ENST00000516498 76 ntBASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 RN7SKP57-201ENST00000517248 293 ntBASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 IGKV3-31-201ENST00000523109 329 ntBASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 AC020895.1-201ENST00000595362 272 ntBASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 AC097639.2-201ENST00000603159 172 ntBASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 AC244205.2-202ENST00000635781 342 ntBASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 U6.115-201ENST00000636045 103 ntBASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PDZRN3Q9UPQ7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 Y_RNA.91-201ENST00000363042 107 ntBASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 Z98749.2-208ENST00000381646 500 ntBASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 MIR624-201ENST00000385217 97 ntBASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 RNU2-37P-201ENST00000410695 177 ntBASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 SNORA18.4-201ENST00000516440 124 ntBASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 RN7SKP209-201ENST00000516888 304 ntBASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 AC244505.7-201ENST00000599675 272 ntBASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDZRN3Q9UPQ7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 DYNLT3P1-201ENST00000378574 347 ntBASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 MIR518D-201ENST00000385014 87 ntBASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 RBMY2UP-201ENST00000453474 324 ntBASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 HMGN2P7-201ENST00000456186 273 ntBASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 snoU13.3-201ENST00000459441 104 ntBASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 MIR4298-201ENST00000584380 73 ntBASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 AP003357.1-201ENST00000604497 148 ntBASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 AC019159.1-201ENST00000605094 187 ntBASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 U4atac.1-201ENST00000618345 95 ntBASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 U6.99-201ENST00000637524 83 ntBASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms