RNA–Protein interactions for RNA: ENST00000565821.1

CYCSP39-201, Transcript of cytochrome c, somatic pseudogene 39, humanhuman

BASIC

Gene CYCSP39, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP39-201ENST00000565821 CHIC1Q5VXU3 224 aa11.86□□□□□ -0.51
CYCSP39-201ENST00000565821 AEBP2Q6ZN18 517 aaPredicted RBP11.84□□□□□ -0.51
CYCSP39-201ENST00000565821 PHF23Q9BUL5 403 aaPredicted RBP10.44□□□□□ -0.74
CYCSP39-201ENST00000565821 SENP3Q9H4L4 574 aaPredicted RBP10.05□□□□□ -0.8
CYCSP39-201ENST00000565821 PLPPR3Q6T4P5 718 aa9.79□□□□□ -0.84
CYCSP39-201ENST00000565821 POTEDQ86YR6 584 aa9.59□□□□□ -0.87
CYCSP39-201ENST00000565821 FOXD1Q16676 465 aa9.27□□□□□ -0.93
CYCSP39-201ENST00000565821 ADRA2BP18089 450 aa9.18□□□□□ -0.94
CYCSP39-201ENST00000565821 PPP6R1Q9UPN7 881 aa9.14□□□□□ -0.95
CYCSP39-201ENST00000565821 PIAS4Q8N2W9 510 aaPredicted RBP8.86□□□□□ -0.99
CYCSP39-201ENST00000565821 KCNA4P22459 653 aa8.77□□□□□ -1.01
CYCSP39-201ENST00000565821 PPP4R3CPQ6ZMV5 832 aa8.66□□□□□ -1.02
CYCSP39-201ENST00000565821 NCBP3Q53F19 620 aaKnown RBP8.56□□□□□ -1.04
CYCSP39-201ENST00000565821 EHMT2Q96KQ7 1210 aa8.56□□□□□ -1.04
CYCSP39-201ENST00000565821 MSH5O43196 834 aa8.48□□□□□ -1.05
CYCSP39-201ENST00000565821 SLC4A1APQ9BWU0 796 aaKnown RBP8.44□□□□□ -1.06
CYCSP39-201ENST00000565821 SCAF1Q9H7N4 1312 aaKnown RBP8.44□□□□□ -1.06
CYCSP39-201ENST00000565821 NPM3O75607 178 aaKnown RBP8.37□□□□□ -1.07
CYCSP39-201ENST00000565821 CNKSR2Q8WXI2 1034 aa8.35□□□□□ -1.07
CYCSP39-201ENST00000565821 CSRNP3Q8WYN3 585 aa8.25□□□□□ -1.09
CYCSP39-201ENST00000565821 MAPK8IP2Q13387 824 aaPredicted RBP8.24□□□□□ -1.09
CYCSP39-201ENST00000565821 RNF216Q9NWF9 866 aaPredicted RBP8.11□□□□□ -1.11
CYCSP39-201ENST00000565821 DMRT2Q9Y5R5 561 aa8.05□□□□□ -1.12
CYCSP39-201ENST00000565821 ZBTB22O15209 634 aa8.03□□□□□ -1.12
CYCSP39-201ENST00000565821 FOXD4L1Q9NU39 408 aa8.01□□□□□ -1.13
CYCSP39-201ENST00000565821 DNAJC5BQ9UF47 199 aa7.99□□□□□ -1.13
CYCSP39-201ENST00000565821 HOXD11P31277 338 aaPredicted RBP7.97□□□□□ -1.13
CYCSP39-201ENST00000565821 DCAF8L1A6NGE4 600 aa7.81□□□□□ -1.16
CYCSP39-201ENST00000565821 SLC4A2P04920 1241 aa7.81□□□□□ -1.16
CYCSP39-201ENST00000565821 MYCNP04198 464 aaPredicted RBP7.75□□□□□ -1.17
CYCSP39-201ENST00000565821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.7□□□□□ -1.18
CYCSP39-201ENST00000565821 ATXN8OSP0DMR3 200 aa7.67□□□□□ -1.18
CYCSP39-201ENST00000565821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.59□□□□□ -1.19
CYCSP39-201ENST00000565821 HNRNPUL2Q1KMD3 747 aaKnown RBP7.59□□□□□ -1.19
CYCSP39-201ENST00000565821 SAMD1Q6SPF0 538 aaPredicted RBP7.57□□□□□ -1.2
CYCSP39-201ENST00000565821 U3KPZ7 1027 aaPredicted RBP7.52□□□□□ -1.21
CYCSP39-201ENST00000565821 FKBP8Q14318 412 aa7.5□□□□□ -1.21
CYCSP39-201ENST00000565821 ATF5Q9Y2D1 282 aaPredicted RBP7.5□□□□□ -1.21
CYCSP39-201ENST00000565821 CACNB1Q02641 598 aaPredicted RBP7.49□□□□□ -1.21
CYCSP39-201ENST00000565821 APLP2Q06481 763 aa7.46□□□□□ -1.22
CYCSP39-201ENST00000565821 ZNF219Q9P2Y4 722 aaPredicted RBP7.38□□□□□ -1.23
CYCSP39-201ENST00000565821 AMER1Q5JTC6 1135 aaPredicted RBP7.32□□□□□ -1.24
CYCSP39-201ENST00000565821 TRHP20396 242 aaPredicted RBP7.31□□□□□ -1.24
CYCSP39-201ENST00000565821 POTEHQ6S545 545 aa7.3□□□□□ -1.24
CYCSP39-201ENST00000565821 RTN4Q9NQC3 1192 aaKnown RBP7.29□□□□□ -1.24
CYCSP39-201ENST00000565821 CAPN15O75808 1086 aa7.28□□□□□ -1.24
CYCSP39-201ENST00000565821 RNF39Q9H2S5 420 aa7.25□□□□□ -1.25
CYCSP39-201ENST00000565821 SPINK5Q9NQ38 1064 aaPredicted RBP7.25□□□□□ -1.25
CYCSP39-201ENST00000565821 FBLN2P98095 1184 aa7.24□□□□□ -1.25
CYCSP39-201ENST00000565821 POLA2Q14181 598 aa7.22□□□□□ -1.25
CYCSP39-201ENST00000565821 SPDYE4A6NLX3 237 aa7.21□□□□□ -1.26
CYCSP39-201ENST00000565821 C1QBPQ07021 282 aaKnown RBP7.21□□□□□ -1.26
CYCSP39-201ENST00000565821 MKRN4PQ13434 485 aaPredicted RBP7.17□□□□□ -1.26
CYCSP39-201ENST00000565821 FBXO3Q9UK99 471 aa7.16□□□□□ -1.26
CYCSP39-201ENST00000565821 ABCB7O75027 752 aa7.14□□□□□ -1.27
CYCSP39-201ENST00000565821 NISCHQ9Y2I1 1504 aa7.12□□□□□ -1.27
CYCSP39-201ENST00000565821 ZBTB12Q9Y330 459 aaPredicted RBP7.12□□□□□ -1.27
CYCSP39-201ENST00000565821 SLC24A1O60721 1099 aa7.07□□□□□ -1.28
CYCSP39-201ENST00000565821 PROM2Q8N271 834 aa7.03□□□□□ -1.28
CYCSP39-201ENST00000565821 VASPP50552 380 aaPredicted RBP7.02□□□□□ -1.29
CYCSP39-201ENST00000565821 DSG3P32926 999 aa7.01□□□□□ -1.29
CYCSP39-201ENST00000565821 ZNF692Q9BU19 519 aaPredicted RBP6.99□□□□□ -1.29
CYCSP39-201ENST00000565821 OSCARQ8IYS5 282 aa6.96□□□□□ -1.3
CYCSP39-201ENST00000565821 SPDYE2BA6NHP3 402 aa6.93□□□□□ -1.3
CYCSP39-201ENST00000565821 SPDYE6P0CI01 402 aa6.93□□□□□ -1.3
CYCSP39-201ENST00000565821 SPDYE2Q495Y8 402 aa6.93□□□□□ -1.3
CYCSP39-201ENST00000565821 IFNLR1Q8IU57 520 aaPredicted RBP6.93□□□□□ -1.3
CYCSP39-201ENST00000565821 KLHL34Q8N239 644 aa6.93□□□□□ -1.3
CYCSP39-201ENST00000565821 DCAF8L2P0C7V8 631 aa6.92□□□□□ -1.3
CYCSP39-201ENST00000565821 PABPN1Q86U42 306 aaKnown RBP eCLIP6.9□□□□□ -1.3
CYCSP39-201ENST00000565821 STAG3Q9UJ98 1225 aa6.89□□□□□ -1.31
CYCSP39-201ENST00000565821 PLCD3Q8N3E9 789 aa6.88□□□□□ -1.31
CYCSP39-201ENST00000565821 SSUH2Q9Y2M2 353 aa6.87□□□□□ -1.31
CYCSP39-201ENST00000565821 MIER1Q8N108 512 aa6.85□□□□□ -1.31
CYCSP39-201ENST00000565821 SPOCK2Q92563 424 aa6.85□□□□□ -1.31
CYCSP39-201ENST00000565821 PLEKHG5O94827 1062 aa6.83□□□□□ -1.32
CYCSP39-201ENST00000565821 PKD2Q13563 968 aa6.79□□□□□ -1.32
CYCSP39-201ENST00000565821 ECM2O94769 699 aaPredicted RBP6.77□□□□□ -1.33
CYCSP39-201ENST00000565821 ZBTB47Q9UFB7 747 aaPredicted RBP6.76□□□□□ -1.33
CYCSP39-201ENST00000565821 PLCB2Q00722 1185 aa6.75□□□□□ -1.33
CYCSP39-201ENST00000565821 CIZ1Q9ULV3 898 aaPredicted RBP6.74□□□□□ -1.33
CYCSP39-201ENST00000565821 HAP1P54257 671 aaPredicted RBP6.72□□□□□ -1.33
CYCSP39-201ENST00000565821 RBM42Q9BTD8 480 aaKnown RBP6.71□□□□□ -1.34
CYCSP39-201ENST00000565821 SPDYE1Q8NFV5 336 aaPredicted RBP6.69□□□□□ -1.34
CYCSP39-201ENST00000565821 CLEC11AQ9Y240 323 aa6.69□□□□□ -1.34
CYCSP39-201ENST00000565821 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.68□□□□□ -1.34
CYCSP39-201ENST00000565821 AKT1S1Q96B36 256 aa6.67□□□□□ -1.34
CYCSP39-201ENST00000565821 RGL2O15211 777 aa6.65□□□□□ -1.34
CYCSP39-201ENST00000565821 PRR29P0C7W0 189 aa6.65□□□□□ -1.34
CYCSP39-201ENST00000565821 BBXQ8WY36 941 aaPredicted RBP6.65□□□□□ -1.34
CYCSP39-201ENST00000565821 CFAP44Q96MT7 982 aa6.63□□□□□ -1.35
CYCSP39-201ENST00000565821 GSE1Q14687 1217 aa6.62□□□□□ -1.35
CYCSP39-201ENST00000565821 DCAF8Q5TAQ9 597 aa6.62□□□□□ -1.35
CYCSP39-201ENST00000565821 PAXIP1Q6ZW49 1069 aaPredicted RBP6.62□□□□□ -1.35
CYCSP39-201ENST00000565821 TRIM41Q8WV44 630 aa6.62□□□□□ -1.35
CYCSP39-201ENST00000565821 CHGAP10645 457 aaKnown RBP6.61□□□□□ -1.35
CYCSP39-201ENST00000565821 REM2Q8IYK8 340 aaPredicted RBP6.61□□□□□ -1.35
CYCSP39-201ENST00000565821 NPM1P06748 294 aaKnown RBP eCLIP6.6□□□□□ -1.35
CYCSP39-201ENST00000565821 VSIG10Q8N0Z9 540 aa6.57□□□□□ -1.36
CYCSP39-201ENST00000565821 SPRYD3Q8NCJ5 442 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms