RNA–Protein interactions for RNA: ENST00000362913.1

SNORD56.1-201, Transcript of small nucleolar RNA, C/D box 56, humanhuman

BASIC

Gene SNORD56, Length 68 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD56.1-201ENST00000362913 AEBP2Q6ZN18 517 aaPredicted RBP12.06□□□□□ -0.48
SNORD56.1-201ENST00000362913 CHIC1Q5VXU3 224 aa12.05□□□□□ -0.48
SNORD56.1-201ENST00000362913 PHF23Q9BUL5 403 aaPredicted RBP10.56□□□□□ -0.72
SNORD56.1-201ENST00000362913 SENP3Q9H4L4 574 aaPredicted RBP10.3□□□□□ -0.76
SNORD56.1-201ENST00000362913 PLPPR3Q6T4P5 718 aa9.9□□□□□ -0.82
SNORD56.1-201ENST00000362913 FOXD1Q16676 465 aa9.47□□□□□ -0.89
SNORD56.1-201ENST00000362913 ADRA2BP18089 450 aa9.24□□□□□ -0.93
SNORD56.1-201ENST00000362913 PPP6R1Q9UPN7 881 aa9.23□□□□□ -0.93
SNORD56.1-201ENST00000362913 PIAS4Q8N2W9 510 aaPredicted RBP8.99□□□□□ -0.97
SNORD56.1-201ENST00000362913 MSH5O43196 834 aa8.74□□□□□ -1.01
SNORD56.1-201ENST00000362913 PPP4R3CPQ6ZMV5 832 aa8.71□□□□□ -1.02
SNORD56.1-201ENST00000362913 KCNA4P22459 653 aa8.69□□□□□ -1.02
SNORD56.1-201ENST00000362913 NCBP3Q53F19 620 aaKnown RBP8.6□□□□□ -1.03
SNORD56.1-201ENST00000362913 SCAF1Q9H7N4 1312 aaKnown RBP8.57□□□□□ -1.04
SNORD56.1-201ENST00000362913 CNKSR2Q8WXI2 1034 aa8.45□□□□□ -1.06
SNORD56.1-201ENST00000362913 NPM3O75607 178 aaKnown RBP8.39□□□□□ -1.07
SNORD56.1-201ENST00000362913 SLC4A1APQ9BWU0 796 aaKnown RBP8.34□□□□□ -1.07
SNORD56.1-201ENST00000362913 MAPK8IP2Q13387 824 aaPredicted RBP8.3□□□□□ -1.08
SNORD56.1-201ENST00000362913 EHMT2Q96KQ7 1210 aa8.26□□□□□ -1.09
SNORD56.1-201ENST00000362913 RNF216Q9NWF9 866 aaPredicted RBP8.25□□□□□ -1.09
SNORD56.1-201ENST00000362913 DNAJC5BQ9UF47 199 aa8.25□□□□□ -1.09
SNORD56.1-201ENST00000362913 DMRT2Q9Y5R5 561 aa8.24□□□□□ -1.09
SNORD56.1-201ENST00000362913 HOXD11P31277 338 aaPredicted RBP8.15□□□□□ -1.1
SNORD56.1-201ENST00000362913 CSRNP3Q8WYN3 585 aa8.12□□□□□ -1.11
SNORD56.1-201ENST00000362913 FOXD4L1Q9NU39 408 aa7.99□□□□□ -1.13
SNORD56.1-201ENST00000362913 ZBTB22O15209 634 aa7.97□□□□□ -1.13
SNORD56.1-201ENST00000362913 SLC4A2P04920 1241 aa7.87□□□□□ -1.15
SNORD56.1-201ENST00000362913 MYCNP04198 464 aaPredicted RBP7.81□□□□□ -1.16
SNORD56.1-201ENST00000362913 DCAF8L1A6NGE4 600 aa7.8□□□□□ -1.16
SNORD56.1-201ENST00000362913 ATXN8OSP0DMR3 200 aa7.75□□□□□ -1.17
SNORD56.1-201ENST00000362913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.75□□□□□ -1.17
SNORD56.1-201ENST00000362913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.7□□□□□ -1.18
SNORD56.1-201ENST00000362913 HNRNPUL2Q1KMD3 747 aaKnown RBP7.7□□□□□ -1.18
SNORD56.1-201ENST00000362913 SAMD1Q6SPF0 538 aaPredicted RBP7.65□□□□□ -1.18
SNORD56.1-201ENST00000362913 U3KPZ7 1027 aaPredicted RBP7.62□□□□□ -1.19
SNORD56.1-201ENST00000362913 APLP2Q06481 763 aa7.58□□□□□ -1.2
SNORD56.1-201ENST00000362913 POTEDQ86YR6 584 aa7.54□□□□□ -1.2
SNORD56.1-201ENST00000362913 ATF5Q9Y2D1 282 aaPredicted RBP7.48□□□□□ -1.21
SNORD56.1-201ENST00000362913 RNF39Q9H2S5 420 aa7.47□□□□□ -1.21
SNORD56.1-201ENST00000362913 C1QBPQ07021 282 aaKnown RBP7.44□□□□□ -1.22
SNORD56.1-201ENST00000362913 ZNF219Q9P2Y4 722 aaPredicted RBP7.41□□□□□ -1.22
SNORD56.1-201ENST00000362913 FKBP8Q14318 412 aa7.32□□□□□ -1.24
SNORD56.1-201ENST00000362913 SPINK5Q9NQ38 1064 aaPredicted RBP7.32□□□□□ -1.24
SNORD56.1-201ENST00000362913 CAPN15O75808 1086 aa7.31□□□□□ -1.24
SNORD56.1-201ENST00000362913 TRHP20396 242 aaPredicted RBP7.31□□□□□ -1.24
SNORD56.1-201ENST00000362913 FBLN2P98095 1184 aa7.26□□□□□ -1.25
SNORD56.1-201ENST00000362913 POLA2Q14181 598 aa7.25□□□□□ -1.25
SNORD56.1-201ENST00000362913 ZBTB12Q9Y330 459 aaPredicted RBP7.25□□□□□ -1.25
SNORD56.1-201ENST00000362913 MKRN4PQ13434 485 aaPredicted RBP7.2□□□□□ -1.26
SNORD56.1-201ENST00000362913 SPDYE4A6NLX3 237 aa7.16□□□□□ -1.26
SNORD56.1-201ENST00000362913 ABCB7O75027 752 aa7.15□□□□□ -1.26
SNORD56.1-201ENST00000362913 DSG3P32926 999 aa7.15□□□□□ -1.26
SNORD56.1-201ENST00000362913 CACNB1Q02641 598 aaPredicted RBP7.12□□□□□ -1.27
SNORD56.1-201ENST00000362913 PROM2Q8N271 834 aa7.11□□□□□ -1.27
SNORD56.1-201ENST00000362913 FBXO3Q9UK99 471 aa7.11□□□□□ -1.27
SNORD56.1-201ENST00000362913 AMER1Q5JTC6 1135 aaPredicted RBP7.09□□□□□ -1.27
SNORD56.1-201ENST00000362913 SPDYE2BA6NHP3 402 aa7.04□□□□□ -1.28
SNORD56.1-201ENST00000362913 SPDYE6P0CI01 402 aa7.04□□□□□ -1.28
SNORD56.1-201ENST00000362913 SPDYE2Q495Y8 402 aa7.04□□□□□ -1.28
SNORD56.1-201ENST00000362913 ZNF692Q9BU19 519 aaPredicted RBP6.99□□□□□ -1.29
SNORD56.1-201ENST00000362913 OSCARQ8IYS5 282 aa6.98□□□□□ -1.29
SNORD56.1-201ENST00000362913 RTN4Q9NQC3 1192 aaKnown RBP6.98□□□□□ -1.29
SNORD56.1-201ENST00000362913 SSUH2Q9Y2M2 353 aa6.98□□□□□ -1.29
SNORD56.1-201ENST00000362913 VASPP50552 380 aaPredicted RBP6.94□□□□□ -1.3
SNORD56.1-201ENST00000362913 STAG3Q9UJ98 1225 aa6.93□□□□□ -1.3
SNORD56.1-201ENST00000362913 PABPN1Q86U42 306 aaKnown RBP eCLIP6.9□□□□□ -1.3
SNORD56.1-201ENST00000362913 RBM42Q9BTD8 480 aaKnown RBP6.89□□□□□ -1.31
SNORD56.1-201ENST00000362913 IFNLR1Q8IU57 520 aaPredicted RBP6.83□□□□□ -1.32
SNORD56.1-201ENST00000362913 AKT1S1Q96B36 256 aa6.83□□□□□ -1.32
SNORD56.1-201ENST00000362913 PLEKHG5O94827 1062 aa6.79□□□□□ -1.32
SNORD56.1-201ENST00000362913 PLCD3Q8N3E9 789 aa6.79□□□□□ -1.32
SNORD56.1-201ENST00000362913 SPDYE1Q8NFV5 336 aaPredicted RBP6.78□□□□□ -1.32
SNORD56.1-201ENST00000362913 ZBTB47Q9UFB7 747 aaPredicted RBP6.78□□□□□ -1.32
SNORD56.1-201ENST00000362913 MIER1Q8N108 512 aa6.77□□□□□ -1.33
SNORD56.1-201ENST00000362913 KLHL34Q8N239 644 aa6.77□□□□□ -1.33
SNORD56.1-201ENST00000362913 SPOCK2Q92563 424 aa6.77□□□□□ -1.33
SNORD56.1-201ENST00000362913 REM2Q8IYK8 340 aaPredicted RBP6.71□□□□□ -1.34
SNORD56.1-201ENST00000362913 SLC24A1O60721 1099 aa6.68□□□□□ -1.34
SNORD56.1-201ENST00000362913 PKD2Q13563 968 aa6.68□□□□□ -1.34
SNORD56.1-201ENST00000362913 PRR29P0C7W0 189 aa6.67□□□□□ -1.34
SNORD56.1-201ENST00000362913 CLEC11AQ9Y240 323 aa6.67□□□□□ -1.34
SNORD56.1-201ENST00000362913 TRIM41Q8WV44 630 aa6.65□□□□□ -1.34
SNORD56.1-201ENST00000362913 ECM2O94769 699 aaPredicted RBP6.62□□□□□ -1.35
SNORD56.1-201ENST00000362913 PITPNM1O00562 1244 aa6.61□□□□□ -1.35
SNORD56.1-201ENST00000362913 GSE1Q14687 1217 aa6.61□□□□□ -1.35
SNORD56.1-201ENST00000362913 CREBZFQ9NS37 354 aa6.61□□□□□ -1.35
SNORD56.1-201ENST00000362913 CIZ1Q9ULV3 898 aaPredicted RBP6.59□□□□□ -1.35
SNORD56.1-201ENST00000362913 NUBP1P53384 320 aa6.58□□□□□ -1.36
SNORD56.1-201ENST00000362913 NPM1P06748 294 aaKnown RBP eCLIP6.57□□□□□ -1.36
SNORD56.1-201ENST00000362913 DCAF8L2P0C7V8 631 aa6.57□□□□□ -1.36
SNORD56.1-201ENST00000362913 MNX1P50219 401 aaPredicted RBP6.57□□□□□ -1.36
SNORD56.1-201ENST00000362913 FAM212AQ96EL1 285 aa6.55□□□□□ -1.36
SNORD56.1-201ENST00000362913 DCAF8Q5TAQ9 597 aa6.53□□□□□ -1.36
SNORD56.1-201ENST00000362913 TAOK2Q9UL54 1235 aa6.53□□□□□ -1.36
SNORD56.1-201ENST00000362913 RGL2O15211 777 aa6.52□□□□□ -1.37
SNORD56.1-201ENST00000362913 PLCB2Q00722 1185 aa6.52□□□□□ -1.37
SNORD56.1-201ENST00000362913 CHRM1P11229 460 aaPredicted RBP6.51□□□□□ -1.37
SNORD56.1-201ENST00000362913 BBXQ8WY36 941 aaPredicted RBP6.51□□□□□ -1.37
SNORD56.1-201ENST00000362913 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.5□□□□□ -1.37
SNORD56.1-201ENST00000362913 FXR2P51116 673 aaKnown RBP eCLIP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms