RNA–Protein interactions for RNA: ENST00000516316.1

RNU6-1299P-201, Transcript of RNA, U6 small nuclear 1299, pseudogene, humanhuman

BASIC

Gene RNU6-1299P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1299P-201ENST00000516316 AEBP2Q6ZN18 517 aaPredicted RBP12.59□□□□□ -0.39
RNU6-1299P-201ENST00000516316 CHIC1Q5VXU3 224 aa11.94□□□□□ -0.5
RNU6-1299P-201ENST00000516316 SENP3Q9H4L4 574 aaPredicted RBP10.69□□□□□ -0.7
RNU6-1299P-201ENST00000516316 PHF23Q9BUL5 403 aaPredicted RBP10.57□□□□□ -0.72
RNU6-1299P-201ENST00000516316 FOXD1Q16676 465 aa9.99□□□□□ -0.81
RNU6-1299P-201ENST00000516316 PLPPR3Q6T4P5 718 aa9.51□□□□□ -0.89
RNU6-1299P-201ENST00000516316 PPP6R1Q9UPN7 881 aa9.37□□□□□ -0.91
RNU6-1299P-201ENST00000516316 MSH5O43196 834 aa9.31□□□□□ -0.92
RNU6-1299P-201ENST00000516316 ADRA2BP18089 450 aa9.31□□□□□ -0.92
RNU6-1299P-201ENST00000516316 PIAS4Q8N2W9 510 aaPredicted RBP9.29□□□□□ -0.92
RNU6-1299P-201ENST00000516316 POTEDQ86YR6 584 aa9.11□□□□□ -0.95
RNU6-1299P-201ENST00000516316 MAPK8IP2Q13387 824 aaPredicted RBP8.56□□□□□ -1.04
RNU6-1299P-201ENST00000516316 DMRT2Q9Y5R5 561 aa8.5□□□□□ -1.05
RNU6-1299P-201ENST00000516316 SCAF1Q9H7N4 1312 aaKnown RBP8.48□□□□□ -1.05
RNU6-1299P-201ENST00000516316 PPP4R3CPQ6ZMV5 832 aa8.36□□□□□ -1.07
RNU6-1299P-201ENST00000516316 HOXD11P31277 338 aaPredicted RBP8.2□□□□□ -1.1
RNU6-1299P-201ENST00000516316 CNKSR2Q8WXI2 1034 aa8.19□□□□□ -1.1
RNU6-1299P-201ENST00000516316 RNF216Q9NWF9 866 aaPredicted RBP8.12□□□□□ -1.11
RNU6-1299P-201ENST00000516316 DCAF8L1A6NGE4 600 aa8.07□□□□□ -1.12
RNU6-1299P-201ENST00000516316 NCBP3Q53F19 620 aaKnown RBP7.99□□□□□ -1.13
RNU6-1299P-201ENST00000516316 RNF39Q9H2S5 420 aa7.98□□□□□ -1.13
RNU6-1299P-201ENST00000516316 CACNB1Q02641 598 aaPredicted RBP7.97□□□□□ -1.13
RNU6-1299P-201ENST00000516316 NPM3O75607 178 aaKnown RBP7.92□□□□□ -1.14
RNU6-1299P-201ENST00000516316 DNAJC5BQ9UF47 199 aa7.92□□□□□ -1.14
RNU6-1299P-201ENST00000516316 C1QBPQ07021 282 aaKnown RBP7.84□□□□□ -1.15
RNU6-1299P-201ENST00000516316 KCNA4P22459 653 aa7.77□□□□□ -1.17
RNU6-1299P-201ENST00000516316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.75□□□□□ -1.17
RNU6-1299P-201ENST00000516316 U3KPZ7 1027 aaPredicted RBP7.64□□□□□ -1.19
RNU6-1299P-201ENST00000516316 SLC4A2P04920 1241 aa7.59□□□□□ -1.19
RNU6-1299P-201ENST00000516316 SPINK5Q9NQ38 1064 aaPredicted RBP7.52□□□□□ -1.21
RNU6-1299P-201ENST00000516316 DSG3P32926 999 aa7.47□□□□□ -1.21
RNU6-1299P-201ENST00000516316 CAPN15O75808 1086 aa7.46□□□□□ -1.22
RNU6-1299P-201ENST00000516316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.36□□□□□ -1.23
RNU6-1299P-201ENST00000516316 APLP2Q06481 763 aa7.36□□□□□ -1.23
RNU6-1299P-201ENST00000516316 HNRNPUL2Q1KMD3 747 aaKnown RBP7.36□□□□□ -1.23
RNU6-1299P-201ENST00000516316 TRHP20396 242 aaPredicted RBP7.34□□□□□ -1.23
RNU6-1299P-201ENST00000516316 SAMD1Q6SPF0 538 aaPredicted RBP7.34□□□□□ -1.23
RNU6-1299P-201ENST00000516316 ZNF219Q9P2Y4 722 aaPredicted RBP7.33□□□□□ -1.24
RNU6-1299P-201ENST00000516316 SLC4A1APQ9BWU0 796 aaKnown RBP7.31□□□□□ -1.24
RNU6-1299P-201ENST00000516316 ABCB7O75027 752 aa7.3□□□□□ -1.24
RNU6-1299P-201ENST00000516316 MYCNP04198 464 aaPredicted RBP7.3□□□□□ -1.24
RNU6-1299P-201ENST00000516316 FOXD4L1Q9NU39 408 aa7.23□□□□□ -1.25
RNU6-1299P-201ENST00000516316 ATF5Q9Y2D1 282 aaPredicted RBP7.18□□□□□ -1.26
RNU6-1299P-201ENST00000516316 ZBTB22O15209 634 aa7.17□□□□□ -1.26
RNU6-1299P-201ENST00000516316 POLA2Q14181 598 aa7.17□□□□□ -1.26
RNU6-1299P-201ENST00000516316 POTEHQ6S545 545 aa7.12□□□□□ -1.27
RNU6-1299P-201ENST00000516316 RBM42Q9BTD8 480 aaKnown RBP7.08□□□□□ -1.28
RNU6-1299P-201ENST00000516316 ATXN8OSP0DMR3 200 aa7.03□□□□□ -1.28
RNU6-1299P-201ENST00000516316 ZBTB12Q9Y330 459 aaPredicted RBP7□□□□□ -1.29
RNU6-1299P-201ENST00000516316 CHRDL2Q6WN34 429 aa6.94□□□□□ -1.3
RNU6-1299P-201ENST00000516316 AKT1S1Q96B36 256 aa6.94□□□□□ -1.3
RNU6-1299P-201ENST00000516316 OSCARQ8IYS5 282 aa6.93□□□□□ -1.3
RNU6-1299P-201ENST00000516316 REM2Q8IYK8 340 aaPredicted RBP6.89□□□□□ -1.31
RNU6-1299P-201ENST00000516316 MKRN4PQ13434 485 aaPredicted RBP6.85□□□□□ -1.31
RNU6-1299P-201ENST00000516316 CSRNP3Q8WYN3 585 aa6.84□□□□□ -1.31
RNU6-1299P-201ENST00000516316 FBLN2P98095 1184 aa6.82□□□□□ -1.32
RNU6-1299P-201ENST00000516316 SPDYE2BA6NHP3 402 aa6.81□□□□□ -1.32
RNU6-1299P-201ENST00000516316 PITPNM1O00562 1244 aa6.81□□□□□ -1.32
RNU6-1299P-201ENST00000516316 SPDYE6P0CI01 402 aa6.81□□□□□ -1.32
RNU6-1299P-201ENST00000516316 SPDYE2Q495Y8 402 aa6.81□□□□□ -1.32
RNU6-1299P-201ENST00000516316 PIP4P2Q8N4L2 257 aa6.79□□□□□ -1.32
RNU6-1299P-201ENST00000516316 FXR2P51116 673 aaKnown RBP eCLIP6.77□□□□□ -1.33
RNU6-1299P-201ENST00000516316 SSUH2Q9Y2M2 353 aa6.74□□□□□ -1.33
RNU6-1299P-201ENST00000516316 ZNF692Q9BU19 519 aaPredicted RBP6.71□□□□□ -1.34
RNU6-1299P-201ENST00000516316 SP7Q8TDD2 431 aaPredicted RBP6.68□□□□□ -1.34
RNU6-1299P-201ENST00000516316 EHMT2Q96KQ7 1210 aa6.68□□□□□ -1.34
RNU6-1299P-201ENST00000516316 SPDYE1Q8NFV5 336 aaPredicted RBP6.67□□□□□ -1.34
RNU6-1299P-201ENST00000516316 CLEC11AQ9Y240 323 aa6.64□□□□□ -1.35
RNU6-1299P-201ENST00000516316 HAX1O00165 279 aa6.63□□□□□ -1.35
RNU6-1299P-201ENST00000516316 PABPN1Q86U42 306 aaKnown RBP eCLIP6.63□□□□□ -1.35
RNU6-1299P-201ENST00000516316 PRKAR2AP13861 404 aaKnown RBP6.62□□□□□ -1.35
RNU6-1299P-201ENST00000516316 EVX2Q03828 476 aa6.62□□□□□ -1.35
RNU6-1299P-201ENST00000516316 C19orf67A6NJJ6 358 aa6.55□□□□□ -1.36
RNU6-1299P-201ENST00000516316 PRR29P0C7W0 189 aa6.55□□□□□ -1.36
RNU6-1299P-201ENST00000516316 CHADLQ6NUI6 762 aa6.55□□□□□ -1.36
RNU6-1299P-201ENST00000516316 SPDYE4A6NLX3 237 aa6.48□□□□□ -1.37
RNU6-1299P-201ENST00000516316 FARP1Q9Y4F1 1045 aaPredicted RBP6.46□□□□□ -1.38
RNU6-1299P-201ENST00000516316 GABBR2O75899 941 aa6.44□□□□□ -1.38
RNU6-1299P-201ENST00000516316 CREBZFQ9NS37 354 aa6.43□□□□□ -1.38
RNU6-1299P-201ENST00000516316 STAG3Q9UJ98 1225 aa6.43□□□□□ -1.38
RNU6-1299P-201ENST00000516316 CD44P16070 742 aaKnown RBP6.4□□□□□ -1.38
RNU6-1299P-201ENST00000516316 PROM2Q8N271 834 aa6.38□□□□□ -1.39
RNU6-1299P-201ENST00000516316 MNX1P50219 401 aaPredicted RBP6.34□□□□□ -1.39
RNU6-1299P-201ENST00000516316 POTEIP0CG38 1075 aa6.33□□□□□ -1.4
RNU6-1299P-201ENST00000516316 CLCN6P51797 869 aa6.33□□□□□ -1.4
RNU6-1299P-201ENST00000516316 ZNF579Q8NAF0 562 aaKnown RBP6.33□□□□□ -1.4
RNU6-1299P-201ENST00000516316 ZRANB1Q9UGI0 708 aa6.31□□□□□ -1.4
RNU6-1299P-201ENST00000516316 NPM1P06748 294 aaKnown RBP eCLIP6.26□□□□□ -1.41
RNU6-1299P-201ENST00000516316 LHX8Q68G74 356 aa6.26□□□□□ -1.41
RNU6-1299P-201ENST00000516316 GALR2O43603 387 aaPredicted RBP6.24□□□□□ -1.41
RNU6-1299P-201ENST00000516316 PHF12Q96QT6 1004 aa6.24□□□□□ -1.41
RNU6-1299P-201ENST00000516316 PAK3O75914 559 aaPredicted RBP6.22□□□□□ -1.41
RNU6-1299P-201ENST00000516316 DCBLD2Q96PD2 775 aa6.22□□□□□ -1.41
RNU6-1299P-201ENST00000516316 MIER1Q8N108 512 aa6.17□□□□□ -1.42
RNU6-1299P-201ENST00000516316 CCDC61Q9Y6R9 512 aa6.17□□□□□ -1.42
RNU6-1299P-201ENST00000516316 MS4A3Q96HJ5 214 aa6.16□□□□□ -1.42
RNU6-1299P-201ENST00000516316 TSPYL2Q9H2G4 693 aaPredicted RBP6.16□□□□□ -1.42
RNU6-1299P-201ENST00000516316 FKBP8Q14318 412 aa6.15□□□□□ -1.42
RNU6-1299P-201ENST00000516316 PELP1Q8IZL8 1130 aaKnown RBP6.15□□□□□ -1.42
RNU6-1299P-201ENST00000516316 RASEFQ8IZ41 740 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms