Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.34□□□□□ -1.88
LRFN4Q6PJG9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
LRFN4Q6PJG9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
LRFN4Q6PJG9 MFSD8-236ENST00000641509 4050 ntBASIC3.34□□□□□ -1.88
LRFN4Q6PJG9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 RNU6-407P-201ENST00000365280 104 ntBASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 RNU6-1235P-201ENST00000384559 107 ntBASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 SNORA22C-201ENST00000384614 134 ntBASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 MIR1193-201ENST00000408109 78 ntBASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 AC008134.1-201ENST00000420943 193 ntBASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 RNU6-498P-201ENST00000459468 107 ntBASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 RNA5SP272-201ENST00000516095 111 ntBASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 AC106785.1-201ENST00000565935 262 ntBASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 AC005972.2-201ENST00000604690 348 ntBASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRFN4Q6PJG9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 RNU6-1290P-201ENST00000362957 109 ntBASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 RNA5SP479-201ENST00000364858 117 ntBASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 U6atac.2-201ENST00000408644 118 ntBASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 RNU6-383P-201ENST00000410864 94 ntBASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 AC126124.2-201ENST00000413542 321 ntBASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 RPL30P4-201ENST00000429309 333 ntBASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 RPS12P18-201ENST00000442381 270 ntBASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 RNA5SP20-201ENST00000515976 84 ntBASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 RNU2-34P-201ENST00000516534 121 ntBASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 AC112693.2-201ENST00000556538 232 ntBASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 MIR3646-201ENST00000578301 84 ntBASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 MIR4425-201ENST00000580572 84 ntBASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 POLR3GP1-201ENST00000594073 261 ntBASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 AL365222.1-201ENST00000614661 98 ntBASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
LRFN4Q6PJG9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 RNU6-438P-201ENST00000365561 103 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 MIR591-201ENST00000385290 95 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 RNA5SP424-201ENST00000390988 115 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 SNORD37.2-201ENST00000391075 66 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 RNU6-735P-201ENST00000410612 107 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 RNU4-43P-201ENST00000410628 137 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 AL135786.1-201ENST00000415892 214 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 MTND4LP9-201ENST00000427694 174 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 RPS29P7-201ENST00000439662 171 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 AC016717.1-201ENST00000448918 286 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 RAC1P5-201ENST00000512182 576 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 AC025647.1-201ENST00000517879 253 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 AC008011.1-201ENST00000545989 227 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 AC087499.8-201ENST00000578406 226 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 LARP7P3-201ENST00000579888 337 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 AC012640.5-201ENST00000623897 319 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 CEP170P1-201ENST00000502249 4587 ntBASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
LRFN4Q6PJG9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 AL356292.1-201ENST00000283110 373 ntBASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 AL139247.1-201ENST00000422768 325 ntBASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 RPL23AP58-201ENST00000440453 469 ntBASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 RNU6-437P-201ENST00000459408 95 ntBASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 AC008155.2-201ENST00000464337 397 ntBASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 RPL23AP54-201ENST00000495129 419 ntBASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 SCARNA3-201ENST00000517097 143 ntBASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 MIR5685-201ENST00000579080 79 ntBASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 AC023043.3-201ENST00000593113 385 ntBASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 VN1R85P-201ENST00000601587 426 ntBASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 AC107294.3-201ENST00000609211 526 ntBASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 MIR7153-201ENST00000637758 57 ntBASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN4Q6PJG9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRFN4Q6PJG9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRFN4Q6PJG9 RNU6-674P-201ENST00000363831 107 ntBASIC3.29□□□□□ -1.88
LRFN4Q6PJG9 MIR539-201ENST00000365690 78 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms