Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AIG1P1-201ENST00000503376 148 ntBASIC4.13□□□□□ -1.75
EFCC1Q9HA90 SCARNA8-201ENST00000515924 131 ntBASIC4.13□□□□□ -1.75
EFCC1Q9HA90 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.13□□□□□ -1.75
EFCC1Q9HA90 AC136628.3-201ENST00000521868 290 ntBASIC4.13□□□□□ -1.75
EFCC1Q9HA90 AC109810.1-201ENST00000534066 224 ntBASIC4.13□□□□□ -1.75
EFCC1Q9HA90 NACAP3-201ENST00000552100 481 ntBASIC4.13□□□□□ -1.75
EFCC1Q9HA90 AC112693.2-201ENST00000556538 232 ntBASIC4.13□□□□□ -1.75
EFCC1Q9HA90 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
EFCC1Q9HA90 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
EFCC1Q9HA90 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
EFCC1Q9HA90 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
EFCC1Q9HA90 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
EFCC1Q9HA90 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
EFCC1Q9HA90 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
EFCC1Q9HA90 RNU6-103P-201ENST00000363686 107 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 SNORA80A-201ENST00000363922 136 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 MIR539-201ENST00000365690 78 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 RNU6-969P-201ENST00000383900 105 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 RNU6-622P-201ENST00000384272 103 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 MIR626-201ENST00000385032 94 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 SNORD17-201ENST00000390930 237 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 AL031003.1-201ENST00000404229 172 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 AC027124.2-201ENST00000428249 105 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 AC006028.1-201ENST00000438379 402 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.12□□□□□ -1.75
EFCC1Q9HA90 RPL23AP70-201ENST00000483361 460 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 TRBV12-2-201ENST00000489763 344 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.12□□□□□ -1.75
EFCC1Q9HA90 AC006199.1-201ENST00000548728 219 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 MIR3923-201ENST00000579521 83 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 U4.6-201ENST00000621618 127 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 MIR3199-2-201ENST00000636243 86 ntBASIC4.12□□□□□ -1.75
EFCC1Q9HA90 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
EFCC1Q9HA90 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
EFCC1Q9HA90 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
EFCC1Q9HA90 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
EFCC1Q9HA90 CEP170P1-201ENST00000502249 4587 ntBASIC4.11□□□□□ -1.75
EFCC1Q9HA90 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.11□□□□□ -1.75
EFCC1Q9HA90 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
EFCC1Q9HA90 SNORA63.4-201ENST00000362763 126 ntBASIC4.11□□□□□ -1.75
EFCC1Q9HA90 Y_RNA.337-201ENST00000365312 102 ntBASIC4.11□□□□□ -1.75
EFCC1Q9HA90 RNU6-1264P-201ENST00000383891 107 ntBASIC4.11□□□□□ -1.75
EFCC1Q9HA90 MT-TT-201ENST00000387460 66 ntBASIC4.11□□□□□ -1.75
EFCC1Q9HA90 RNU6-855P-201ENST00000410395 104 ntBASIC4.11□□□□□ -1.75
EFCC1Q9HA90 AC074290.1-201ENST00000448883 135 ntBASIC4.11□□□□□ -1.75
EFCC1Q9HA90 EEF1B2P7-201ENST00000451177 676 ntBASIC4.11□□□□□ -1.75
EFCC1Q9HA90 HMGN2P16-201ENST00000456802 261 ntBASIC4.11□□□□□ -1.75
EFCC1Q9HA90 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.11□□□□□ -1.75
EFCC1Q9HA90 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.11□□□□□ -1.75
EFCC1Q9HA90 RNU5F-2P-201ENST00000516066 82 ntBASIC4.11□□□□□ -1.75
EFCC1Q9HA90 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.11□□□□□ -1.75
EFCC1Q9HA90 AC105137.2-201ENST00000569073 466 ntBASIC4.11□□□□□ -1.75
EFCC1Q9HA90 AL391813.1-201ENST00000603098 260 ntBASIC4.11□□□□□ -1.75
EFCC1Q9HA90 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.11□□□□□ -1.75
EFCC1Q9HA90 Y_RNA.802-201ENST00000614892 130 ntBASIC4.11□□□□□ -1.75
EFCC1Q9HA90 AC073308.1-201ENST00000623696 305 ntBASIC4.11□□□□□ -1.75
EFCC1Q9HA90 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.11□□□□□ -1.75
EFCC1Q9HA90 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
EFCC1Q9HA90 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
EFCC1Q9HA90 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
EFCC1Q9HA90 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.1□□□□□ -1.75
EFCC1Q9HA90 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
EFCC1Q9HA90 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
EFCC1Q9HA90 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
EFCC1Q9HA90 RNU6-407P-201ENST00000365280 104 ntBASIC4.1□□□□□ -1.75
EFCC1Q9HA90 RNU6-460P-201ENST00000391158 108 ntBASIC4.1□□□□□ -1.75
EFCC1Q9HA90 YPEL5P1-201ENST00000419731 367 ntBASIC4.1□□□□□ -1.75
EFCC1Q9HA90 RPS27P29-201ENST00000463110 252 ntBASIC4.1□□□□□ -1.75
EFCC1Q9HA90 RPL27AP5-201ENST00000469428 449 ntBASIC4.1□□□□□ -1.75
EFCC1Q9HA90 AC093663.1-201ENST00000497190 394 ntBASIC4.1□□□□□ -1.75
EFCC1Q9HA90 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.1□□□□□ -1.75
EFCC1Q9HA90 RNU1-61P-201ENST00000516107 151 ntBASIC4.1□□□□□ -1.75
EFCC1Q9HA90 AC115990.1-201ENST00000526957 301 ntBASIC4.1□□□□□ -1.75
EFCC1Q9HA90 AL110115.1-201ENST00000614396 364 ntBASIC4.1□□□□□ -1.75
EFCC1Q9HA90 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
EFCC1Q9HA90 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
EFCC1Q9HA90 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.09□□□□□ -1.75
EFCC1Q9HA90 CYCSP49-201ENST00000420810 319 ntBASIC4.09□□□□□ -1.75
EFCC1Q9HA90 BPY2DP-201ENST00000422208 265 ntBASIC4.09□□□□□ -1.75
EFCC1Q9HA90 AC004386.2-201ENST00000441858 148 ntBASIC4.09□□□□□ -1.75
EFCC1Q9HA90 U3.44-201ENST00000458938 192 ntBASIC4.09□□□□□ -1.75
EFCC1Q9HA90 RNA5SP341-201ENST00000516261 117 ntBASIC4.09□□□□□ -1.75
EFCC1Q9HA90 RNU2-56P-201ENST00000516826 190 ntBASIC4.09□□□□□ -1.75
EFCC1Q9HA90 AL356575.1-201ENST00000603008 283 ntBASIC4.09□□□□□ -1.75
EFCC1Q9HA90 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
EFCC1Q9HA90 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
EFCC1Q9HA90 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.08□□□□□ -1.76
EFCC1Q9HA90 AC002543.1-201ENST00000299783 1954 ntBASIC4.08□□□□□ -1.76
EFCC1Q9HA90 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
EFCC1Q9HA90 Y_RNA.172-201ENST00000363765 102 ntBASIC4.08□□□□□ -1.76
EFCC1Q9HA90 Y_RNA.341-201ENST00000365341 102 ntBASIC4.08□□□□□ -1.76
EFCC1Q9HA90 SNORA48.8-201ENST00000391324 134 ntBASIC4.08□□□□□ -1.76
EFCC1Q9HA90 NDUFB1P1-201ENST00000435191 180 ntBASIC4.08□□□□□ -1.76
EFCC1Q9HA90 AL161651.1-201ENST00000440882 223 ntBASIC4.08□□□□□ -1.76
EFCC1Q9HA90 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
EFCC1Q9HA90 RNU4-57P-201ENST00000515980 135 ntBASIC4.08□□□□□ -1.76
EFCC1Q9HA90 AC022336.2-201ENST00000568966 2538 ntBASIC4.08□□□□□ -1.76
EFCC1Q9HA90 MIR5004-201ENST00000579078 107 ntBASIC4.08□□□□□ -1.76
EFCC1Q9HA90 MIR5006-201ENST00000583027 110 ntBASIC4.08□□□□□ -1.76
EFCC1Q9HA90 MIR3136-201ENST00000583498 78 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms