Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VARS2Q5ST30 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.68□□□□□ -1.66
VARS2Q5ST30 RNU5F-4P-201ENST00000516581 114 ntBASIC4.68□□□□□ -1.66
VARS2Q5ST30 RN7SL176P-201ENST00000580352 264 ntBASIC4.68□□□□□ -1.66
VARS2Q5ST30 MIR3944-201ENST00000581277 108 ntBASIC4.68□□□□□ -1.66
VARS2Q5ST30 MIR4753-201ENST00000585119 83 ntBASIC4.68□□□□□ -1.66
VARS2Q5ST30 AC112200.1-201ENST00000625015 234 ntBASIC4.68□□□□□ -1.66
VARS2Q5ST30 AC095038.3-201ENST00000634439 195 ntBASIC4.68□□□□□ -1.66
VARS2Q5ST30 MIR492-201ENST00000638676 116 ntBASIC4.68□□□□□ -1.66
VARS2Q5ST30 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VARS2Q5ST30 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VARS2Q5ST30 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.68□□□□□ -1.66
VARS2Q5ST30 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VARS2Q5ST30 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.68□□□□□ -1.66
VARS2Q5ST30 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VARS2Q5ST30 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VARS2Q5ST30 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VARS2Q5ST30 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.67□□□□□ -1.66
VARS2Q5ST30 SPRR2C-201ENST00000290702 219 ntBASIC4.67□□□□□ -1.66
VARS2Q5ST30 RNU6-1210P-201ENST00000363775 107 ntBASIC4.67□□□□□ -1.66
VARS2Q5ST30 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.67□□□□□ -1.66
VARS2Q5ST30 Y_RNA.609-201ENST00000410669 89 ntBASIC4.67□□□□□ -1.66
VARS2Q5ST30 AC010401.1-201ENST00000463867 348 ntBASIC4.67□□□□□ -1.66
VARS2Q5ST30 HMGN1P7-201ENST00000491722 313 ntBASIC4.67□□□□□ -1.66
VARS2Q5ST30 RPL23AP63-201ENST00000498752 471 ntBASIC4.67□□□□□ -1.66
VARS2Q5ST30 RNU1-45P-201ENST00000517191 141 ntBASIC4.67□□□□□ -1.66
VARS2Q5ST30 RPL23AP97-201ENST00000568955 471 ntBASIC4.67□□□□□ -1.66
VARS2Q5ST30 AL513534.2-201ENST00000603836 250 ntBASIC4.67□□□□□ -1.66
VARS2Q5ST30 AC096577.2-201ENST00000611455 153 ntBASIC4.67□□□□□ -1.66
VARS2Q5ST30 AC091905.2-201ENST00000623143 306 ntBASIC4.67□□□□□ -1.66
VARS2Q5ST30 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.67□□□□□ -1.66
VARS2Q5ST30 AC073346.2-201ENST00000624724 2058 ntBASIC4.67□□□□□ -1.66
VARS2Q5ST30 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VARS2Q5ST30 AL139811.1-201ENST00000424779 2299 ntBASIC4.67□□□□□ -1.66
VARS2Q5ST30 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VARS2Q5ST30 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VARS2Q5ST30 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VARS2Q5ST30 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
VARS2Q5ST30 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.67□□□□□ -1.66
VARS2Q5ST30 AC004944.1-201ENST00000517807 3059 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VARS2Q5ST30 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
VARS2Q5ST30 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.66□□□□□ -1.66
VARS2Q5ST30 AC010680.1-201ENST00000590024 3590 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 AC068254.2-201ENST00000623938 3577 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 MIR383-201ENST00000362257 73 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 RNA5SP151-201ENST00000365632 117 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 PPIAP31-201ENST00000405422 495 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.66□□□□□ -1.66
VARS2Q5ST30 AC108751.2-201ENST00000469993 231 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 RN7SL812P-201ENST00000493791 279 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 PPBPP1-201ENST00000510807 373 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 AC093729.1-201ENST00000513074 128 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 RNA5SP446-201ENST00000515955 82 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 SCARNA13-201ENST00000516672 275 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 SNX18P1Y-201ENST00000616231 511 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VARS2Q5ST30 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.66□□□□□ -1.66
VARS2Q5ST30 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
VARS2Q5ST30 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VARS2Q5ST30 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VARS2Q5ST30 AL133243.3-201ENST00000617415 3004 ntBASIC4.66□□□□□ -1.66
VARS2Q5ST30 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.66□□□□□ -1.66
VARS2Q5ST30 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VARS2Q5ST30 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VARS2Q5ST30 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.65□□□□□ -1.66
VARS2Q5ST30 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
VARS2Q5ST30 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.65□□□□□ -1.66
VARS2Q5ST30 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VARS2Q5ST30 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.65□□□□□ -1.66
VARS2Q5ST30 SNORD46.1-201ENST00000364139 104 ntBASIC4.65□□□□□ -1.67
VARS2Q5ST30 PTMAP2-201ENST00000397627 327 ntBASIC4.65□□□□□ -1.67
VARS2Q5ST30 RN7SL691P-201ENST00000494487 301 ntBASIC4.65□□□□□ -1.67
VARS2Q5ST30 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.65□□□□□ -1.67
VARS2Q5ST30 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.65□□□□□ -1.67
VARS2Q5ST30 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VARS2Q5ST30 Y_RNA.788-201ENST00000622394 112 ntBASIC4.65□□□□□ -1.67
VARS2Q5ST30 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VARS2Q5ST30 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VARS2Q5ST30 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VARS2Q5ST30 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
VARS2Q5ST30 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
VARS2Q5ST30 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
VARS2Q5ST30 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VARS2Q5ST30 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VARS2Q5ST30 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
VARS2Q5ST30 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.64□□□□□ -1.67
VARS2Q5ST30 RN7SL703P-201ENST00000578485 302 ntBASIC4.64□□□□□ -1.67
VARS2Q5ST30 RNA5SP108-201ENST00000605921 117 ntBASIC4.64□□□□□ -1.67
VARS2Q5ST30 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.64□□□□□ -1.67
VARS2Q5ST30 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
VARS2Q5ST30 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.64□□□□□ -1.67
VARS2Q5ST30 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VARS2Q5ST30 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VARS2Q5ST30 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VARS2Q5ST30 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VARS2Q5ST30 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VARS2Q5ST30 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms