Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
FOXD4L1Q9NU39 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
FOXD4L1Q9NU39 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
FOXD4L1Q9NU39 ICE2P2-201ENST00000483823 2787 ntBASIC5.89□□□□□ -1.47
FOXD4L1Q9NU39 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
FOXD4L1Q9NU39 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
FOXD4L1Q9NU39 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
FOXD4L1Q9NU39 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
FOXD4L1Q9NU39 RNU6-60P-201ENST00000364792 103 ntBASIC5.89□□□□□ -1.47
FOXD4L1Q9NU39 MIR1271-201ENST00000408537 86 ntBASIC5.89□□□□□ -1.47
FOXD4L1Q9NU39 AC009414.1-201ENST00000427200 443 ntBASIC5.89□□□□□ -1.47
FOXD4L1Q9NU39 RPS17P2-201ENST00000461663 408 ntBASIC5.89□□□□□ -1.47
FOXD4L1Q9NU39 CKS1BP2-201ENST00000497342 240 ntBASIC5.89□□□□□ -1.47
FOXD4L1Q9NU39 MIR4762-201ENST00000585261 75 ntBASIC5.89□□□□□ -1.47
FOXD4L1Q9NU39 AC011445.2-201ENST00000599274 173 ntBASIC5.89□□□□□ -1.47
FOXD4L1Q9NU39 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.89□□□□□ -1.47
FOXD4L1Q9NU39 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
FOXD4L1Q9NU39 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
FOXD4L1Q9NU39 AC107068.1-201ENST00000563286 4218 ntBASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 RNA5SP242-201ENST00000364171 118 ntBASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 Y_RNA.336-201ENST00000365307 109 ntBASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 RNU6-1077P-201ENST00000410506 102 ntBASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 SNRPGP14-201ENST00000435400 219 ntBASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 RNU2-11P-201ENST00000459191 187 ntBASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 RN7SL466P-201ENST00000497546 295 ntBASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 RNU6-1041P-201ENST00000516254 102 ntBASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 SCARNA21.2-201ENST00000516600 166 ntBASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 SCARNA11.3-201ENST00000517276 130 ntBASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 MIR4666B-201ENST00000578142 81 ntBASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 AL513534.2-201ENST00000603836 250 ntBASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 MIR8069-1-201ENST00000616627 86 ntBASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 MIR8069-2-201ENST00000621412 86 ntBASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 AC064859.1-201ENST00000624741 174 ntBASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
FOXD4L1Q9NU39 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 AC091564.4-201ENST00000533934 2194 ntBASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 RN7SKP113-201ENST00000363891 295 ntBASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 SNORA67-201ENST00000384423 137 ntBASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 BTF3P4-201ENST00000418852 495 ntBASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 RN7SL441P-201ENST00000492388 296 ntBASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 AC026726.1-201ENST00000512859 601 ntBASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 AC019288.1-201ENST00000557918 224 ntBASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 MIR5739-201ENST00000619803 80 ntBASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 AC007546.2-201ENST00000623996 360 ntBASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 AC140479.6-201ENST00000633535 357 ntBASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 MIR338-201ENST00000636369 67 ntBASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.87□□□□□ -1.47
FOXD4L1Q9NU39 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 MIR340-201ENST00000362125 95 ntBASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 U8.5-201ENST00000364528 136 ntBASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 RN7SKP206-201ENST00000410823 293 ntBASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 SDHDP6-201ENST00000414693 480 ntBASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 CKS1BP6-201ENST00000424932 240 ntBASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 AC073261.1-201ENST00000429409 121 ntBASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 RNU7-171P-201ENST00000459581 62 ntBASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 SNORD45.4-201ENST00000516629 73 ntBASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 Y_RNA.705-201ENST00000516862 110 ntBASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 SNORD95-201ENST00000579879 68 ntBASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 AC002984.1-201ENST00000591692 448 ntBASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 Y_RNA.773-201ENST00000607168 90 ntBASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 UCA1.1-201ENST00000620952 75 ntBASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
FOXD4L1Q9NU39 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 SNORD115-13-201ENST00000363358 82 ntBASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 SNORD115-16-201ENST00000363887 82 ntBASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 SNORD115-1-201ENST00000364961 82 ntBASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 Y_RNA.313-201ENST00000365095 103 ntBASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 RNU6-24P-201ENST00000384440 107 ntBASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 RNA5SP144-201ENST00000410846 116 ntBASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 RPL37P18-201ENST00000411602 243 ntBASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 AC004812.1-201ENST00000540773 146 ntBASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 MIR548Z-201ENST00000584743 97 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms