Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC7.09□□□□□ -1.27
SCAF1Q9H7N4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC7.09□□□□□ -1.27
SCAF1Q9H7N4 AL133162.1-201ENST00000463228 453 ntBASIC7.09□□□□□ -1.27
SCAF1Q9H7N4 RNU6-948P-201ENST00000516374 107 ntBASIC7.09□□□□□ -1.27
SCAF1Q9H7N4 RNU7-25P-201ENST00000516544 62 ntBASIC7.09□□□□□ -1.27
SCAF1Q9H7N4 HMGN2P15-201ENST00000585707 270 ntBASIC7.09□□□□□ -1.27
SCAF1Q9H7N4 RNU6-86P-201ENST00000606534 107 ntBASIC7.09□□□□□ -1.27
SCAF1Q9H7N4 AL359075.3-201ENST00000613288 217 ntBASIC7.09□□□□□ -1.27
SCAF1Q9H7N4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SCAF1Q9H7N4 Y_RNA.242-201ENST00000364473 110 ntBASIC7.08□□□□□ -1.28
SCAF1Q9H7N4 RNA5SP509-201ENST00000364577 119 ntBASIC7.08□□□□□ -1.28
SCAF1Q9H7N4 RNA5SP90-201ENST00000364801 99 ntBASIC7.08□□□□□ -1.28
SCAF1Q9H7N4 SNORA70F-201ENST00000384142 135 ntBASIC7.08□□□□□ -1.28
SCAF1Q9H7N4 AL645608.4-201ENST00000423619 154 ntBASIC7.08□□□□□ -1.28
SCAF1Q9H7N4 RPEP3-201ENST00000425462 676 ntBASIC7.08□□□□□ -1.28
SCAF1Q9H7N4 SCARNA10-201ENST00000459255 330 ntBASIC7.08□□□□□ -1.28
SCAF1Q9H7N4 SNORA18.7-201ENST00000516910 131 ntBASIC7.08□□□□□ -1.28
SCAF1Q9H7N4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC7.08□□□□□ -1.28
SCAF1Q9H7N4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
SCAF1Q9H7N4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SCAF1Q9H7N4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCAF1Q9H7N4 NEAT1-202ENST00000501122 22743 ntBASIC7.08□□□□□ -1.28
SCAF1Q9H7N4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCAF1Q9H7N4 RNA5SP372-201ENST00000390836 115 ntBASIC7.07□□□□□ -1.28
SCAF1Q9H7N4 RN7SKP200-201ENST00000410564 320 ntBASIC7.07□□□□□ -1.28
SCAF1Q9H7N4 AL441985.1-201ENST00000457727 251 ntBASIC7.07□□□□□ -1.28
SCAF1Q9H7N4 RNU7-80P-201ENST00000459562 61 ntBASIC7.07□□□□□ -1.28
SCAF1Q9H7N4 RNU6-1073P-201ENST00000517182 106 ntBASIC7.07□□□□□ -1.28
SCAF1Q9H7N4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC7.07□□□□□ -1.28
SCAF1Q9H7N4 CYCSP40-201ENST00000575927 294 ntBASIC7.07□□□□□ -1.28
SCAF1Q9H7N4 MIR4444-1-201ENST00000581696 74 ntBASIC7.07□□□□□ -1.28
SCAF1Q9H7N4 MIR4444-2-201ENST00000584390 74 ntBASIC7.07□□□□□ -1.28
SCAF1Q9H7N4 AC002984.1-201ENST00000591692 448 ntBASIC7.07□□□□□ -1.28
SCAF1Q9H7N4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SCAF1Q9H7N4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCAF1Q9H7N4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC7.07□□□□□ -1.28
SCAF1Q9H7N4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC7.07□□□□□ -1.28
SCAF1Q9H7N4 MIR554-201ENST00000384874 96 ntBASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 RNA5SP144-201ENST00000410846 116 ntBASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 CKS1BP6-201ENST00000424932 240 ntBASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 RN7SL542P-201ENST00000467147 294 ntBASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 ENPP7P9-201ENST00000514456 627 ntBASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 RNU1-45P-201ENST00000517191 141 ntBASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 5S_rRNA.16-201ENST00000612928 119 ntBASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 MIR376B-201ENST00000614515 100 ntBASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 MAPK10-253ENST00000641010 4072 ntBASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
SCAF1Q9H7N4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 MIR342-201ENST00000362212 99 ntBASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 RNU1-57P-201ENST00000384491 166 ntBASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 MIR802-201ENST00000390235 94 ntBASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 RPS12P10-201ENST00000427031 377 ntBASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 LINC00901.1-201ENST00000617252 152 ntBASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SCAF1Q9H7N4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC7.04□□□□□ -1.28
SCAF1Q9H7N4 RNU6-315P-201ENST00000362666 107 ntBASIC7.04□□□□□ -1.28
SCAF1Q9H7N4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SCAF1Q9H7N4 MIR520G-201ENST00000385064 90 ntBASIC7.04□□□□□ -1.28
SCAF1Q9H7N4 RN7SL517P-201ENST00000462240 305 ntBASIC7.04□□□□□ -1.28
SCAF1Q9H7N4 HIGD1AP1-201ENST00000550979 275 ntBASIC7.04□□□□□ -1.28
SCAF1Q9H7N4 AC140658.3-201ENST00000567603 271 ntBASIC7.04□□□□□ -1.28
SCAF1Q9H7N4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SCAF1Q9H7N4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
SCAF1Q9H7N4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SCAF1Q9H7N4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC7.04□□□□□ -1.28
SCAF1Q9H7N4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SCAF1Q9H7N4 RN7SKP153-201ENST00000365026 316 ntBASIC7.03□□□□□ -1.28
SCAF1Q9H7N4 MIR519C-201ENST00000385053 87 ntBASIC7.03□□□□□ -1.28
SCAF1Q9H7N4 MIR589-201ENST00000385238 99 ntBASIC7.03□□□□□ -1.28
SCAF1Q9H7N4 AL022718.1-201ENST00000412004 84 ntBASIC7.03□□□□□ -1.28
SCAF1Q9H7N4 SNX2P2-201ENST00000424553 323 ntBASIC7.03□□□□□ -1.28
SCAF1Q9H7N4 AC099677.2-201ENST00000436385 175 ntBASIC7.03□□□□□ -1.28
SCAF1Q9H7N4 PHBP16-201ENST00000446318 950 ntBASIC7.03□□□□□ -1.28
SCAF1Q9H7N4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC7.03□□□□□ -1.28
SCAF1Q9H7N4 MIR3944-201ENST00000581277 108 ntBASIC7.03□□□□□ -1.28
SCAF1Q9H7N4 AL161756.2-201ENST00000604597 246 ntBASIC7.03□□□□□ -1.28
SCAF1Q9H7N4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCAF1Q9H7N4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms