Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 LRRC37A11P-202ENST00000579258 3717 ntBASIC1.93□□□□□ -2.1
LCE4AQ5TA78 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 RNA5SP319-201ENST00000362768 119 ntBASIC1.93□□□□□ -2.1
LCE4AQ5TA78 Y_RNA.56-201ENST00000362798 112 ntBASIC1.93□□□□□ -2.1
LCE4AQ5TA78 RNA5SP500-201ENST00000364486 119 ntBASIC1.93□□□□□ -2.1
LCE4AQ5TA78 RNA5SP51-201ENST00000364750 119 ntBASIC1.93□□□□□ -2.1
LCE4AQ5TA78 MIR630-201ENST00000384957 97 ntBASIC1.93□□□□□ -2.1
LCE4AQ5TA78 MIR561-201ENST00000385216 97 ntBASIC1.93□□□□□ -2.1
LCE4AQ5TA78 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 RNU6-1054P-201ENST00000411293 104 ntBASIC1.93□□□□□ -2.1
LCE4AQ5TA78 AC006539.3-201ENST00000454258 129 ntBASIC1.93□□□□□ -2.1
LCE4AQ5TA78 snoU13.22-201ENST00000459428 104 ntBASIC1.93□□□□□ -2.1
LCE4AQ5TA78 RPS17P15-201ENST00000475609 349 ntBASIC1.93□□□□□ -2.1
LCE4AQ5TA78 RN7SL222P-201ENST00000476452 299 ntBASIC1.93□□□□□ -2.1
LCE4AQ5TA78 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 MIR4480-201ENST00000582492 71 ntBASIC1.93□□□□□ -2.1
LCE4AQ5TA78 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE4AQ5TA78 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 MIR101-2-201ENST00000362195 79 ntBASIC1.92□□□□□ -2.1
LCE4AQ5TA78 MIR192-201ENST00000384915 110 ntBASIC1.92□□□□□ -2.1
LCE4AQ5TA78 MIR1302-7-201ENST00000408841 72 ntBASIC1.92□□□□□ -2.1
LCE4AQ5TA78 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 RN7SL72P-201ENST00000460697 269 ntBASIC1.92□□□□□ -2.1
LCE4AQ5TA78 AC026726.1-201ENST00000512859 601 ntBASIC1.92□□□□□ -2.1
LCE4AQ5TA78 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 SNORA70D-201ENST00000578836 135 ntBASIC1.92□□□□□ -2.1
LCE4AQ5TA78 MIR4260-201ENST00000583107 67 ntBASIC1.92□□□□□ -2.1
LCE4AQ5TA78 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.92□□□□□ -2.1
LCE4AQ5TA78 AC006111.3-201ENST00000622137 383 ntBASIC1.92□□□□□ -2.1
LCE4AQ5TA78 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 AC009948.5-201ENST00000624360 4406 ntBASIC1.92□□□□□ -2.1
LCE4AQ5TA78 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE4AQ5TA78 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms