Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
GABREP78334 MIR335-201ENST00000362173 94 ntBASIC3.25□□□□□ -1.89
GABREP78334 SNORA68.1-201ENST00000364537 132 ntBASIC3.25□□□□□ -1.89
GABREP78334 Y_RNA.286-201ENST00000364813 102 ntBASIC3.25□□□□□ -1.89
GABREP78334 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.25□□□□□ -1.89
GABREP78334 RNU6-290P-201ENST00000365212 101 ntBASIC3.25□□□□□ -1.89
GABREP78334 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
GABREP78334 AL357075.1-201ENST00000404107 726 ntBASIC3.25□□□□□ -1.89
GABREP78334 MIR548H3-201ENST00000408771 118 ntBASIC3.25□□□□□ -1.89
GABREP78334 ELOCP21-201ENST00000412558 336 ntBASIC3.25□□□□□ -1.89
GABREP78334 RAB28P5-201ENST00000427490 651 ntBASIC3.25□□□□□ -1.89
GABREP78334 MICF-203ENST00000432679 129 ntBASIC3.25□□□□□ -1.89
GABREP78334 MTND1P19-201ENST00000511780 315 ntBASIC3.25□□□□□ -1.89
GABREP78334 RNU6-1023P-201ENST00000516137 106 ntBASIC3.25□□□□□ -1.89
GABREP78334 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.25□□□□□ -1.89
GABREP78334 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.25□□□□□ -1.89
GABREP78334 AC006001.4-201ENST00000622243 395 ntBASIC3.25□□□□□ -1.89
GABREP78334 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.25□□□□□ -1.89
GABREP78334 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.25□□□□□ -1.89
GABREP78334 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.25□□□□□ -1.89
GABREP78334 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
GABREP78334 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
GABREP78334 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.24□□□□□ -1.89
GABREP78334 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.24□□□□□ -1.89
GABREP78334 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
GABREP78334 AC000403.1-201ENST00000613696 3585 ntBASIC3.24□□□□□ -1.89
GABREP78334 RNU1-72P-201ENST00000362976 153 ntBASIC3.24□□□□□ -1.89
GABREP78334 SNORD32B-201ENST00000364460 84 ntBASIC3.24□□□□□ -1.89
GABREP78334 RNU6-1274P-201ENST00000384557 107 ntBASIC3.24□□□□□ -1.89
GABREP78334 U6atac.2-201ENST00000408644 118 ntBASIC3.24□□□□□ -1.89
GABREP78334 AC139712.2-201ENST00000424302 339 ntBASIC3.24□□□□□ -1.89
GABREP78334 AC006989.1-201ENST00000427212 131 ntBASIC3.24□□□□□ -1.89
GABREP78334 RNU6-586P-201ENST00000517265 104 ntBASIC3.24□□□□□ -1.89
GABREP78334 AC105245.1-201ENST00000581934 244 ntBASIC3.24□□□□□ -1.89
GABREP78334 AL713866.2-201ENST00000603579 219 ntBASIC3.24□□□□□ -1.89
GABREP78334 AC069294.1-201ENST00000608397 350 ntBASIC3.24□□□□□ -1.89
GABREP78334 AC078938.1-201ENST00000620993 318 ntBASIC3.24□□□□□ -1.89
GABREP78334 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.24□□□□□ -1.89
GABREP78334 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
GABREP78334 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.24□□□□□ -1.89
GABREP78334 AC080128.1-201ENST00000474389 1917 ntBASIC3.24□□□□□ -1.89
GABREP78334 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GABREP78334 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GABREP78334 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GABREP78334 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GABREP78334 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
GABREP78334 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
GABREP78334 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
GABREP78334 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
GABREP78334 MIR422A-201ENST00000362286 90 ntBASIC3.23□□□□□ -1.89
GABREP78334 SNORD27-201ENST00000363981 72 ntBASIC3.23□□□□□ -1.89
GABREP78334 SNORD56.5-201ENST00000364281 72 ntBASIC3.23□□□□□ -1.89
GABREP78334 SNORD87-201ENST00000364849 89 ntBASIC3.23□□□□□ -1.89
GABREP78334 Y_RNA.331-201ENST00000365267 102 ntBASIC3.23□□□□□ -1.89
GABREP78334 Y_RNA.552-201ENST00000384665 112 ntBASIC3.23□□□□□ -1.89
GABREP78334 SNORA53-201ENST00000391141 249 ntBASIC3.23□□□□□ -1.89
GABREP78334 U3.39-201ENST00000408569 239 ntBASIC3.23□□□□□ -1.89
GABREP78334 RNA5SP475-201ENST00000410568 110 ntBASIC3.23□□□□□ -1.89
GABREP78334 AC126124.2-201ENST00000413542 321 ntBASIC3.23□□□□□ -1.89
GABREP78334 RPL23AP36-201ENST00000413895 458 ntBASIC3.23□□□□□ -1.89
GABREP78334 AL513477.1-202ENST00000417061 214 ntBASIC3.23□□□□□ -1.89
GABREP78334 RPS29P31-201ENST00000446147 164 ntBASIC3.23□□□□□ -1.89
GABREP78334 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.23□□□□□ -1.89
GABREP78334 RN7SL594P-201ENST00000470590 287 ntBASIC3.23□□□□□ -1.89
GABREP78334 RPS23P5-201ENST00000495419 428 ntBASIC3.23□□□□□ -1.89
GABREP78334 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.23□□□□□ -1.89
GABREP78334 MIR449C-201ENST00000516047 92 ntBASIC3.23□□□□□ -1.89
GABREP78334 RNU5F-4P-201ENST00000516581 114 ntBASIC3.23□□□□□ -1.89
GABREP78334 AC055872.1-201ENST00000570978 278 ntBASIC3.23□□□□□ -1.89
GABREP78334 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.23□□□□□ -1.89
GABREP78334 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.23□□□□□ -1.89
GABREP78334 AC023043.3-201ENST00000593113 385 ntBASIC3.23□□□□□ -1.89
GABREP78334 RPL17P51-201ENST00000605218 238 ntBASIC3.23□□□□□ -1.89
GABREP78334 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.23□□□□□ -1.89
GABREP78334 AC068205.3-201ENST00000636385 468 ntBASIC3.23□□□□□ -1.89
GABREP78334 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
GABREP78334 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
GABREP78334 MFSD8-233ENST00000641482 4860 ntBASIC3.22□□□□□ -1.89
GABREP78334 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.22□□□□□ -1.89
GABREP78334 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
GABREP78334 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
GABREP78334 RNU1-75P-201ENST00000347264 129 ntBASIC3.22□□□□□ -1.89
GABREP78334 Y_RNA.54-201ENST00000362766 105 ntBASIC3.22□□□□□ -1.89
GABREP78334 RNU6-944P-201ENST00000364023 107 ntBASIC3.22□□□□□ -1.89
GABREP78334 RNU6-1310P-201ENST00000384153 107 ntBASIC3.22□□□□□ -1.89
GABREP78334 Y_RNA.478-201ENST00000384358 107 ntBASIC3.22□□□□□ -1.89
GABREP78334 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.22□□□□□ -1.89
GABREP78334 MIR1294-201ENST00000408503 142 ntBASIC3.22□□□□□ -1.89
GABREP78334 RNU4-47P-201ENST00000410876 114 ntBASIC3.22□□□□□ -1.89
GABREP78334 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.22□□□□□ -1.89
GABREP78334 UBBP3-201ENST00000445497 241 ntBASIC3.22□□□□□ -1.89
GABREP78334 AC090515.1-201ENST00000465295 476 ntBASIC3.22□□□□□ -1.89
GABREP78334 HMGB3P17-201ENST00000504195 649 ntBASIC3.22□□□□□ -1.89
GABREP78334 RNA5SP380-201ENST00000517190 98 ntBASIC3.22□□□□□ -1.89
GABREP78334 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.22□□□□□ -1.89
GABREP78334 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.22□□□□□ -1.89
GABREP78334 MIR3124-201ENST00000582636 67 ntBASIC3.22□□□□□ -1.89
GABREP78334 AC010620.2-201ENST00000600135 313 ntBASIC3.22□□□□□ -1.89
GABREP78334 AC037487.3-201ENST00000606668 112 ntBASIC3.22□□□□□ -1.89
GABREP78334 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms