RNA–Protein interactions for RNA: ENST00000408771.1

MIR548H3-201, Transcript of microRNA 548h-3, humanhuman

BASIC

Gene MIR548H3, Length 118 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548H3-201ENST00000408771 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
MIR548H3-201ENST00000408771 CHIC1Q5VXU3 224 aa17.46■□□□□ 0.39
MIR548H3-201ENST00000408771 SENP3Q9H4L4 574 aaPredicted RBP15.78■□□□□ 0.12
MIR548H3-201ENST00000408771 PHF23Q9BUL5 403 aaPredicted RBP15.58■□□□□ 0.08
MIR548H3-201ENST00000408771 FOXD1Q16676 465 aa14.8□□□□□ -0.04
MIR548H3-201ENST00000408771 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
MIR548H3-201ENST00000408771 MSH5O43196 834 aa13.82□□□□□ -0.2
MIR548H3-201ENST00000408771 PLPPR3Q6T4P5 718 aa13.81□□□□□ -0.2
MIR548H3-201ENST00000408771 PPP6R1Q9UPN7 881 aa13.76□□□□□ -0.21
MIR548H3-201ENST00000408771 PIAS4Q8N2W9 510 aaPredicted RBP13.74□□□□□ -0.21
MIR548H3-201ENST00000408771 ADRA2BP18089 450 aa13.66□□□□□ -0.22
MIR548H3-201ENST00000408771 MAPK8IP2Q13387 824 aaPredicted RBP12.61□□□□□ -0.39
MIR548H3-201ENST00000408771 DMRT2Q9Y5R5 561 aa12.53□□□□□ -0.4
MIR548H3-201ENST00000408771 SCAF1Q9H7N4 1312 aaKnown RBP12.35□□□□□ -0.43
MIR548H3-201ENST00000408771 PPP4R3CPQ6ZMV5 832 aa12.12□□□□□ -0.47
MIR548H3-201ENST00000408771 HOXD11P31277 338 aaPredicted RBP12.01□□□□□ -0.49
MIR548H3-201ENST00000408771 DCAF8L1A6NGE4 600 aa11.94□□□□□ -0.5
MIR548H3-201ENST00000408771 CACNB1Q02641 598 aaPredicted RBP11.94□□□□□ -0.5
MIR548H3-201ENST00000408771 CNKSR2Q8WXI2 1034 aa11.9□□□□□ -0.5
MIR548H3-201ENST00000408771 RNF216Q9NWF9 866 aaPredicted RBP11.85□□□□□ -0.51
MIR548H3-201ENST00000408771 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
MIR548H3-201ENST00000408771 C1QBPQ07021 282 aaKnown RBP11.6□□□□□ -0.55
MIR548H3-201ENST00000408771 DNAJC5BQ9UF47 199 aa11.59□□□□□ -0.55
MIR548H3-201ENST00000408771 NCBP3Q53F19 620 aaKnown RBP11.51□□□□□ -0.57
MIR548H3-201ENST00000408771 NPM3O75607 178 aaKnown RBP11.47□□□□□ -0.57
MIR548H3-201ENST00000408771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.36□□□□□ -0.59
MIR548H3-201ENST00000408771 U3KPZ7 1027 aaPredicted RBP11.21□□□□□ -0.61
MIR548H3-201ENST00000408771 KCNA4P22459 653 aa11.13□□□□□ -0.63
MIR548H3-201ENST00000408771 SPINK5Q9NQ38 1064 aaPredicted RBP11.1□□□□□ -0.63
MIR548H3-201ENST00000408771 SLC4A2P04920 1241 aa11.04□□□□□ -0.64
MIR548H3-201ENST00000408771 DSG3P32926 999 aa11.04□□□□□ -0.64
MIR548H3-201ENST00000408771 CAPN15O75808 1086 aa10.99□□□□□ -0.65
MIR548H3-201ENST00000408771 TRHP20396 242 aaPredicted RBP10.79□□□□□ -0.68
MIR548H3-201ENST00000408771 ABCB7O75027 752 aa10.78□□□□□ -0.68
MIR548H3-201ENST00000408771 POTEHQ6S545 545 aa10.78□□□□□ -0.68
MIR548H3-201ENST00000408771 ZNF219Q9P2Y4 722 aaPredicted RBP10.75□□□□□ -0.69
MIR548H3-201ENST00000408771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.69□□□□□ -0.7
MIR548H3-201ENST00000408771 APLP2Q06481 763 aa10.69□□□□□ -0.7
MIR548H3-201ENST00000408771 HNRNPUL2Q1KMD3 747 aaKnown RBP10.69□□□□□ -0.7
MIR548H3-201ENST00000408771 SAMD1Q6SPF0 538 aaPredicted RBP10.66□□□□□ -0.7
MIR548H3-201ENST00000408771 MYCNP04198 464 aaPredicted RBP10.56□□□□□ -0.72
MIR548H3-201ENST00000408771 POLA2Q14181 598 aa10.48□□□□□ -0.73
MIR548H3-201ENST00000408771 RBM42Q9BTD8 480 aaKnown RBP10.44□□□□□ -0.74
MIR548H3-201ENST00000408771 ATF5Q9Y2D1 282 aaPredicted RBP10.43□□□□□ -0.74
MIR548H3-201ENST00000408771 SLC4A1APQ9BWU0 796 aaKnown RBP10.41□□□□□ -0.74
MIR548H3-201ENST00000408771 FOXD4L1Q9NU39 408 aa10.39□□□□□ -0.75
MIR548H3-201ENST00000408771 CHRDL2Q6WN34 429 aa10.33□□□□□ -0.76
MIR548H3-201ENST00000408771 ZBTB22O15209 634 aa10.3□□□□□ -0.76
MIR548H3-201ENST00000408771 OSCARQ8IYS5 282 aa10.21□□□□□ -0.77
MIR548H3-201ENST00000408771 AKT1S1Q96B36 256 aa10.2□□□□□ -0.78
MIR548H3-201ENST00000408771 ZBTB12Q9Y330 459 aaPredicted RBP10.19□□□□□ -0.78
MIR548H3-201ENST00000408771 REM2Q8IYK8 340 aaPredicted RBP10.14□□□□□ -0.79
MIR548H3-201ENST00000408771 PIP4P2Q8N4L2 257 aa10.09□□□□□ -0.79
MIR548H3-201ENST00000408771 PITPNM1O00562 1244 aa10.06□□□□□ -0.8
MIR548H3-201ENST00000408771 ATXN8OSP0DMR3 200 aa10.04□□□□□ -0.8
MIR548H3-201ENST00000408771 SP7Q8TDD2 431 aaPredicted RBP10.03□□□□□ -0.8
MIR548H3-201ENST00000408771 FXR2P51116 673 aaKnown RBP eCLIP10□□□□□ -0.81
MIR548H3-201ENST00000408771 MKRN4PQ13434 485 aaPredicted RBP9.94□□□□□ -0.82
MIR548H3-201ENST00000408771 SPDYE2BA6NHP3 402 aa9.91□□□□□ -0.82
MIR548H3-201ENST00000408771 SPDYE6P0CI01 402 aa9.91□□□□□ -0.82
MIR548H3-201ENST00000408771 SPDYE2Q495Y8 402 aa9.91□□□□□ -0.82
MIR548H3-201ENST00000408771 FBLN2P98095 1184 aa9.87□□□□□ -0.83
MIR548H3-201ENST00000408771 HAX1O00165 279 aa9.86□□□□□ -0.83
MIR548H3-201ENST00000408771 EVX2Q03828 476 aa9.86□□□□□ -0.83
MIR548H3-201ENST00000408771 SSUH2Q9Y2M2 353 aa9.83□□□□□ -0.84
MIR548H3-201ENST00000408771 PRKAR2AP13861 404 aaKnown RBP9.76□□□□□ -0.85
MIR548H3-201ENST00000408771 SPDYE1Q8NFV5 336 aaPredicted RBP9.76□□□□□ -0.85
MIR548H3-201ENST00000408771 ZNF692Q9BU19 519 aaPredicted RBP9.74□□□□□ -0.85
MIR548H3-201ENST00000408771 CLEC11AQ9Y240 323 aa9.74□□□□□ -0.85
MIR548H3-201ENST00000408771 C19orf67A6NJJ6 358 aa9.68□□□□□ -0.86
MIR548H3-201ENST00000408771 CHADLQ6NUI6 762 aa9.65□□□□□ -0.86
MIR548H3-201ENST00000408771 PABPN1Q86U42 306 aaKnown RBP eCLIP9.63□□□□□ -0.87
MIR548H3-201ENST00000408771 CSRNP3Q8WYN3 585 aa9.63□□□□□ -0.87
MIR548H3-201ENST00000408771 GABBR2O75899 941 aa9.56□□□□□ -0.88
MIR548H3-201ENST00000408771 PRR29P0C7W0 189 aa9.55□□□□□ -0.88
MIR548H3-201ENST00000408771 FARP1Q9Y4F1 1045 aaPredicted RBP9.46□□□□□ -0.9
MIR548H3-201ENST00000408771 POTEIP0CG38 1075 aa9.43□□□□□ -0.9
MIR548H3-201ENST00000408771 CD44P16070 742 aaKnown RBP9.43□□□□□ -0.9
MIR548H3-201ENST00000408771 LHX8Q68G74 356 aa9.38□□□□□ -0.91
MIR548H3-201ENST00000408771 EHMT2Q96KQ7 1210 aa9.38□□□□□ -0.91
MIR548H3-201ENST00000408771 CREBZFQ9NS37 354 aa9.37□□□□□ -0.91
MIR548H3-201ENST00000408771 ZNF579Q8NAF0 562 aaKnown RBP9.31□□□□□ -0.92
MIR548H3-201ENST00000408771 SPDYE4A6NLX3 237 aa9.3□□□□□ -0.92
MIR548H3-201ENST00000408771 ZRANB1Q9UGI0 708 aa9.27□□□□□ -0.93
MIR548H3-201ENST00000408771 STAG3Q9UJ98 1225 aa9.25□□□□□ -0.93
MIR548H3-201ENST00000408771 GALR2O43603 387 aaPredicted RBP9.24□□□□□ -0.93
MIR548H3-201ENST00000408771 CLCN6P51797 869 aa9.24□□□□□ -0.93
MIR548H3-201ENST00000408771 MNX1P50219 401 aaPredicted RBP9.23□□□□□ -0.93
MIR548H3-201ENST00000408771 DCBLD2Q96PD2 775 aa9.19□□□□□ -0.94
MIR548H3-201ENST00000408771 PHF12Q96QT6 1004 aa9.18□□□□□ -0.94
MIR548H3-201ENST00000408771 PROM2Q8N271 834 aa9.14□□□□□ -0.95
MIR548H3-201ENST00000408771 POTEB2H3BUK9 544 aa9.12□□□□□ -0.95
MIR548H3-201ENST00000408771 PELP1Q8IZL8 1130 aaKnown RBP9.09□□□□□ -0.95
MIR548H3-201ENST00000408771 OTUD5Q96G74 571 aa9.08□□□□□ -0.96
MIR548H3-201ENST00000408771 PAK3O75914 559 aaPredicted RBP9.07□□□□□ -0.96
MIR548H3-201ENST00000408771 NPM1P06748 294 aaKnown RBP eCLIP9.06□□□□□ -0.96
MIR548H3-201ENST00000408771 MS4A3Q96HJ5 214 aa9.06□□□□□ -0.96
MIR548H3-201ENST00000408771 ASTLQ6HA08 431 aaPredicted RBP9.01□□□□□ -0.97
MIR548H3-201ENST00000408771 ATMINO43313 823 aaPredicted RBP8.99□□□□□ -0.97
MIR548H3-201ENST00000408771 CCDC61Q9Y6R9 512 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms