RNA–Protein interactions for RNA: ENST00000427490.1

RAB28P5-201, Transcript of RAB28, member RAS oncogene family pseudogene 5, humanhuman

BASIC

Gene RAB28P5, Length 651 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P5-201ENST00000427490 AEBP2Q6ZN18 517 aaPredicted RBP16.98■□□□□ 0.31
RAB28P5-201ENST00000427490 CHIC1Q5VXU3 224 aa15.95■□□□□ 0.14
RAB28P5-201ENST00000427490 POTEDQ86YR6 584 aa15.22■□□□□ 0.03
RAB28P5-201ENST00000427490 SENP3Q9H4L4 574 aaPredicted RBP14.76□□□□□ -0.05
RAB28P5-201ENST00000427490 PHF23Q9BUL5 403 aaPredicted RBP14.39□□□□□ -0.11
RAB28P5-201ENST00000427490 FOXD1Q16676 465 aa13.86□□□□□ -0.19
RAB28P5-201ENST00000427490 MSH5O43196 834 aa13.5□□□□□ -0.25
RAB28P5-201ENST00000427490 PIAS4Q8N2W9 510 aaPredicted RBP12.74□□□□□ -0.37
RAB28P5-201ENST00000427490 CACNB1Q02641 598 aaPredicted RBP12.4□□□□□ -0.42
RAB28P5-201ENST00000427490 PPP6R1Q9UPN7 881 aa12.12□□□□□ -0.47
RAB28P5-201ENST00000427490 ADRA2BP18089 450 aa12.07□□□□□ -0.48
RAB28P5-201ENST00000427490 PLPPR3Q6T4P5 718 aa11.98□□□□□ -0.49
RAB28P5-201ENST00000427490 POTEHQ6S545 545 aa11.72□□□□□ -0.53
RAB28P5-201ENST00000427490 DMRT2Q9Y5R5 561 aa11.47□□□□□ -0.57
RAB28P5-201ENST00000427490 RNF39Q9H2S5 420 aa11.35□□□□□ -0.59
RAB28P5-201ENST00000427490 MAPK8IP2Q13387 824 aaPredicted RBP11.34□□□□□ -0.59
RAB28P5-201ENST00000427490 DCAF8L1A6NGE4 600 aa11.25□□□□□ -0.61
RAB28P5-201ENST00000427490 C1QBPQ07021 282 aaKnown RBP11.15□□□□□ -0.62
RAB28P5-201ENST00000427490 SCAF1Q9H7N4 1312 aaKnown RBP11.11□□□□□ -0.63
RAB28P5-201ENST00000427490 HOXD11P31277 338 aaPredicted RBP10.64□□□□□ -0.71
RAB28P5-201ENST00000427490 PPP4R3CPQ6ZMV5 832 aa10.41□□□□□ -0.74
RAB28P5-201ENST00000427490 SP7Q8TDD2 431 aaPredicted RBP10.41□□□□□ -0.74
RAB28P5-201ENST00000427490 RNF216Q9NWF9 866 aaPredicted RBP10.41□□□□□ -0.74
RAB28P5-201ENST00000427490 DNAJC5BQ9UF47 199 aa10.39□□□□□ -0.75
RAB28P5-201ENST00000427490 CNKSR2Q8WXI2 1034 aa10.36□□□□□ -0.75
RAB28P5-201ENST00000427490 PLSCR2Q9NRY7 297 aa10.3□□□□□ -0.76
RAB28P5-201ENST00000427490 DSG3P32926 999 aa10.24□□□□□ -0.77
RAB28P5-201ENST00000427490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.21□□□□□ -0.77
RAB28P5-201ENST00000427490 CAPN15O75808 1086 aa10.12□□□□□ -0.79
RAB28P5-201ENST00000427490 CHRDL2Q6WN34 429 aa10.11□□□□□ -0.79
RAB28P5-201ENST00000427490 SPINK5Q9NQ38 1064 aaPredicted RBP9.99□□□□□ -0.81
RAB28P5-201ENST00000427490 NCBP3Q53F19 620 aaKnown RBP9.86□□□□□ -0.83
RAB28P5-201ENST00000427490 U3KPZ7 1027 aaPredicted RBP9.86□□□□□ -0.83
RAB28P5-201ENST00000427490 RBM42Q9BTD8 480 aaKnown RBP9.85□□□□□ -0.83
RAB28P5-201ENST00000427490 HAX1O00165 279 aa9.84□□□□□ -0.83
RAB28P5-201ENST00000427490 LHX8Q68G74 356 aa9.77□□□□□ -0.85
RAB28P5-201ENST00000427490 ABCB7O75027 752 aa9.75□□□□□ -0.85
RAB28P5-201ENST00000427490 TRHP20396 242 aaPredicted RBP9.68□□□□□ -0.86
RAB28P5-201ENST00000427490 NPM3O75607 178 aaKnown RBP9.66□□□□□ -0.86
RAB28P5-201ENST00000427490 ZNF219Q9P2Y4 722 aaPredicted RBP9.62□□□□□ -0.87
RAB28P5-201ENST00000427490 APLP2Q06481 763 aa9.6□□□□□ -0.87
RAB28P5-201ENST00000427490 PIP4P2Q8N4L2 257 aa9.59□□□□□ -0.87
RAB28P5-201ENST00000427490 EVX2Q03828 476 aa9.5□□□□□ -0.89
RAB28P5-201ENST00000427490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.42□□□□□ -0.9
RAB28P5-201ENST00000427490 HNRNPUL2Q1KMD3 747 aaKnown RBP9.42□□□□□ -0.9
RAB28P5-201ENST00000427490 SLC4A2P04920 1241 aa9.36□□□□□ -0.91
RAB28P5-201ENST00000427490 AKT1S1Q96B36 256 aa9.34□□□□□ -0.91
RAB28P5-201ENST00000427490 SAMD1Q6SPF0 538 aaPredicted RBP9.32□□□□□ -0.92
RAB28P5-201ENST00000427490 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
RAB28P5-201ENST00000427490 POTEMA6NI47 508 aa9.28□□□□□ -0.92
RAB28P5-201ENST00000427490 GABBR2O75899 941 aa9.26□□□□□ -0.93
RAB28P5-201ENST00000427490 POLA2Q14181 598 aa9.26□□□□□ -0.93
RAB28P5-201ENST00000427490 REM2Q8IYK8 340 aaPredicted RBP9.25□□□□□ -0.93
RAB28P5-201ENST00000427490 POTEGQ6S5H5 508 aa9.2□□□□□ -0.94
RAB28P5-201ENST00000427490 PCDH10Q9P2E7 1040 aa9.17□□□□□ -0.94
RAB28P5-201ENST00000427490 PITPNM1O00562 1244 aa9.16□□□□□ -0.94
RAB28P5-201ENST00000427490 C19orf67A6NJJ6 358 aa9.05□□□□□ -0.96
RAB28P5-201ENST00000427490 ZBTB12Q9Y330 459 aaPredicted RBP9.02□□□□□ -0.97
RAB28P5-201ENST00000427490 POTEIP0CG38 1075 aa9□□□□□ -0.97
RAB28P5-201ENST00000427490 MYCNP04198 464 aaPredicted RBP8.97□□□□□ -0.97
RAB28P5-201ENST00000427490 PRKAR2AP13861 404 aaKnown RBP8.96□□□□□ -0.98
RAB28P5-201ENST00000427490 OSCARQ8IYS5 282 aa8.96□□□□□ -0.98
RAB28P5-201ENST00000427490 OTUD5Q96G74 571 aa8.93□□□□□ -0.98
RAB28P5-201ENST00000427490 KCNA4P22459 653 aa8.92□□□□□ -0.98
RAB28P5-201ENST00000427490 DCBLD2Q96PD2 775 aa8.84□□□□□ -0.99
RAB28P5-201ENST00000427490 ATF5Q9Y2D1 282 aaPredicted RBP8.78□□□□□ -1
RAB28P5-201ENST00000427490 CLEC11AQ9Y240 323 aa8.76□□□□□ -1.01
RAB28P5-201ENST00000427490 POTEB2H3BUK9 544 aa8.69□□□□□ -1.02
RAB28P5-201ENST00000427490 CLCN6P51797 869 aa8.69□□□□□ -1.02
RAB28P5-201ENST00000427490 SPDYE1Q8NFV5 336 aaPredicted RBP8.69□□□□□ -1.02
RAB28P5-201ENST00000427490 FAM163AQ96GL9 167 aaPredicted RBP8.68□□□□□ -1.02
RAB28P5-201ENST00000427490 SPDYE2BA6NHP3 402 aa8.67□□□□□ -1.02
RAB28P5-201ENST00000427490 SPDYE6P0CI01 402 aa8.67□□□□□ -1.02
RAB28P5-201ENST00000427490 SPDYE2Q495Y8 402 aa8.67□□□□□ -1.02
RAB28P5-201ENST00000427490 CHADLQ6NUI6 762 aa8.61□□□□□ -1.03
RAB28P5-201ENST00000427490 CD44P16070 742 aaKnown RBP8.6□□□□□ -1.03
RAB28P5-201ENST00000427490 CDAN1Q8IWY9 1227 aa8.59□□□□□ -1.03
RAB28P5-201ENST00000427490 LCE2DQ5TA82 110 aaPredicted RBP8.58□□□□□ -1.04
RAB28P5-201ENST00000427490 FBLN2P98095 1184 aa8.55□□□□□ -1.04
RAB28P5-201ENST00000427490 FOXD4L1Q9NU39 408 aa8.54□□□□□ -1.04
RAB28P5-201ENST00000427490 MMRN1Q13201 1228 aa8.51□□□□□ -1.05
RAB28P5-201ENST00000427490 ZNF692Q9BU19 519 aaPredicted RBP8.51□□□□□ -1.05
RAB28P5-201ENST00000427490 PRR29P0C7W0 189 aa8.5□□□□□ -1.05
RAB28P5-201ENST00000427490 MAMSTRQ6ZN01 415 aa8.45□□□□□ -1.06
RAB28P5-201ENST00000427490 SSUH2Q9Y2M2 353 aa8.45□□□□□ -1.06
RAB28P5-201ENST00000427490 FARP1Q9Y4F1 1045 aaPredicted RBP8.4□□□□□ -1.06
RAB28P5-201ENST00000427490 SPNS2Q8IVW8 549 aa8.38□□□□□ -1.07
RAB28P5-201ENST00000427490 GALR2O43603 387 aaPredicted RBP8.37□□□□□ -1.07
RAB28P5-201ENST00000427490 SCUBE2Q9NQ36 999 aa8.36□□□□□ -1.07
RAB28P5-201ENST00000427490 PABPN1Q86U42 306 aaKnown RBP eCLIP8.34□□□□□ -1.07
RAB28P5-201ENST00000427490 ZNF579Q8NAF0 562 aaKnown RBP8.34□□□□□ -1.07
RAB28P5-201ENST00000427490 SLC4A1APQ9BWU0 796 aaKnown RBP8.34□□□□□ -1.07
RAB28P5-201ENST00000427490 POTEJP0CG39 1038 aa8.33□□□□□ -1.08
RAB28P5-201ENST00000427490 MKRN4PQ13434 485 aaPredicted RBP8.33□□□□□ -1.08
RAB28P5-201ENST00000427490 ZRANB1Q9UGI0 708 aa8.33□□□□□ -1.08
RAB28P5-201ENST00000427490 ATXN8OSP0DMR3 200 aa8.32□□□□□ -1.08
RAB28P5-201ENST00000427490 METRNQ9UJH8 293 aa8.3□□□□□ -1.08
RAB28P5-201ENST00000427490 PELP1Q8IZL8 1130 aaKnown RBP8.28□□□□□ -1.08
RAB28P5-201ENST00000427490 C7P10643 843 aa8.22□□□□□ -1.09
RAB28P5-201ENST00000427490 SLC39A7Q92504 469 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms