Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RNU4-67P-201ENST00000364569 141 ntBASIC4.58□□□□□ -1.68
LHX6Q9UPM6 RNY1P4-201ENST00000384595 115 ntBASIC4.58□□□□□ -1.68
LHX6Q9UPM6 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.58□□□□□ -1.68
LHX6Q9UPM6 AC099677.2-201ENST00000436385 175 ntBASIC4.58□□□□□ -1.68
LHX6Q9UPM6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.58□□□□□ -1.68
LHX6Q9UPM6 RN7SL290P-201ENST00000578661 300 ntBASIC4.58□□□□□ -1.68
LHX6Q9UPM6 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.58□□□□□ -1.68
LHX6Q9UPM6 MIR548BB-201ENST00000626714 66 ntBASIC4.58□□□□□ -1.68
LHX6Q9UPM6 MIR203B-201ENST00000636080 86 ntBASIC4.58□□□□□ -1.68
LHX6Q9UPM6 MIR1255B1-201ENST00000636325 63 ntBASIC4.58□□□□□ -1.68
LHX6Q9UPM6 AC012442.3-202ENST00000636742 206 ntBASIC4.58□□□□□ -1.68
LHX6Q9UPM6 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LHX6Q9UPM6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LHX6Q9UPM6 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.57□□□□□ -1.68
LHX6Q9UPM6 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.57□□□□□ -1.68
LHX6Q9UPM6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.57□□□□□ -1.68
LHX6Q9UPM6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LHX6Q9UPM6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LHX6Q9UPM6 SNORA63.1-201ENST00000362493 131 ntBASIC4.57□□□□□ -1.68
LHX6Q9UPM6 SNORD31B-201ENST00000364977 69 ntBASIC4.57□□□□□ -1.68
LHX6Q9UPM6 Y_RNA.316-201ENST00000365118 111 ntBASIC4.57□□□□□ -1.68
LHX6Q9UPM6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LHX6Q9UPM6 MIR605-201ENST00000385078 83 ntBASIC4.57□□□□□ -1.68
LHX6Q9UPM6 RNA5SP397-201ENST00000391323 118 ntBASIC4.57□□□□□ -1.68
LHX6Q9UPM6 EIF4A1P3-201ENST00000411521 244 ntBASIC4.57□□□□□ -1.68
LHX6Q9UPM6 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.57□□□□□ -1.68
LHX6Q9UPM6 RN7SL814P-201ENST00000487715 300 ntBASIC4.57□□□□□ -1.68
LHX6Q9UPM6 Y_RNA.659-201ENST00000515994 113 ntBASIC4.57□□□□□ -1.68
LHX6Q9UPM6 MIR3936-201ENST00000584304 110 ntBASIC4.57□□□□□ -1.68
LHX6Q9UPM6 AC091979.2-201ENST00000607514 214 ntBASIC4.57□□□□□ -1.68
LHX6Q9UPM6 AC013412.1-201ENST00000610687 192 ntBASIC4.57□□□□□ -1.68
LHX6Q9UPM6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LHX6Q9UPM6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LHX6Q9UPM6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.57□□□□□ -1.68
LHX6Q9UPM6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LHX6Q9UPM6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
LHX6Q9UPM6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LHX6Q9UPM6 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 FAM35DP-201ENST00000323387 2712 ntBASIC4.56□□□□□ -1.68
LHX6Q9UPM6 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 RNU6-50P-201ENST00000362356 103 ntBASIC4.56□□□□□ -1.68
LHX6Q9UPM6 RNU1-96P-201ENST00000364163 162 ntBASIC4.56□□□□□ -1.68
LHX6Q9UPM6 RNU1-13P-201ENST00000384499 162 ntBASIC4.56□□□□□ -1.68
LHX6Q9UPM6 MIR200C-201ENST00000384980 68 ntBASIC4.56□□□□□ -1.68
LHX6Q9UPM6 MIR634-201ENST00000385208 97 ntBASIC4.56□□□□□ -1.68
LHX6Q9UPM6 MIR1294-201ENST00000408503 142 ntBASIC4.56□□□□□ -1.68
LHX6Q9UPM6 SNORA77-201ENST00000408716 125 ntBASIC4.56□□□□□ -1.68
LHX6Q9UPM6 PARP4P3-201ENST00000510265 317 ntBASIC4.56□□□□□ -1.68
LHX6Q9UPM6 MIR449C-201ENST00000516047 92 ntBASIC4.56□□□□□ -1.68
LHX6Q9UPM6 RNA5SP468-201ENST00000516782 93 ntBASIC4.56□□□□□ -1.68
LHX6Q9UPM6 MIR4778-201ENST00000577635 80 ntBASIC4.56□□□□□ -1.68
LHX6Q9UPM6 Y_RNA.773-201ENST00000607168 90 ntBASIC4.56□□□□□ -1.68
LHX6Q9UPM6 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 AC007546.2-201ENST00000623996 360 ntBASIC4.56□□□□□ -1.68
LHX6Q9UPM6 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 AC010889.1-201ENST00000566193 2666 ntBASIC4.56□□□□□ -1.68
LHX6Q9UPM6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LHX6Q9UPM6 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
LHX6Q9UPM6 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LHX6Q9UPM6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LHX6Q9UPM6 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.55□□□□□ -1.68
LHX6Q9UPM6 SPRR2C-201ENST00000290702 219 ntBASIC4.55□□□□□ -1.68
LHX6Q9UPM6 RNU6-509P-201ENST00000363519 107 ntBASIC4.55□□□□□ -1.68
LHX6Q9UPM6 SNORD116-10-201ENST00000363791 102 ntBASIC4.55□□□□□ -1.68
LHX6Q9UPM6 RNA5SP223-201ENST00000365174 120 ntBASIC4.55□□□□□ -1.68
LHX6Q9UPM6 RNU6-234P-201ENST00000365229 104 ntBASIC4.55□□□□□ -1.68
LHX6Q9UPM6 Y_RNA.377-201ENST00000365644 108 ntBASIC4.55□□□□□ -1.68
LHX6Q9UPM6 SNORA2.3-201ENST00000383920 135 ntBASIC4.55□□□□□ -1.68
LHX6Q9UPM6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.55□□□□□ -1.68
LHX6Q9UPM6 MIR548O-201ENST00000408583 114 ntBASIC4.55□□□□□ -1.68
LHX6Q9UPM6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.55□□□□□ -1.68
LHX6Q9UPM6 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC4.55□□□□□ -1.68
LHX6Q9UPM6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC4.55□□□□□ -1.68
LHX6Q9UPM6 AL133162.1-201ENST00000463228 453 ntBASIC4.55□□□□□ -1.68
LHX6Q9UPM6 AC010401.1-201ENST00000463867 348 ntBASIC4.55□□□□□ -1.68
LHX6Q9UPM6 AC079598.5-201ENST00000547460 117 ntBASIC4.55□□□□□ -1.68
LHX6Q9UPM6 SNX18P1Y-201ENST00000616231 511 ntBASIC4.55□□□□□ -1.68
LHX6Q9UPM6 U4atac.1-201ENST00000618345 95 ntBASIC4.55□□□□□ -1.68
LHX6Q9UPM6 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.55□□□□□ -1.68
LHX6Q9UPM6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LHX6Q9UPM6 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LHX6Q9UPM6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LHX6Q9UPM6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms