Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 NBPF8-201ENST00000583271 5330 ntBASIC1.74□□□□□ -2.13
KRTAP4-11Q9BYQ6 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-11Q9BYQ6 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-11Q9BYQ6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.74□□□□□ -2.13
KRTAP4-11Q9BYQ6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 SPATA31C1-201ENST00000420021 3895 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 AC009237.3-203ENST00000442128 3551 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 MIR375-201ENST00000362103 64 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 Y_RNA.13-201ENST00000362403 112 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 RNU1-150P-201ENST00000362491 162 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 RNA5SP51-201ENST00000364750 119 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 MIR548AA1-201ENST00000384971 97 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 MIR519A2-201ENST00000384990 87 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 MIR223-201ENST00000385204 110 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 RHEBP3-201ENST00000411920 351 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 AL513328.1-201ENST00000446460 224 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 RN7SL385P-201ENST00000468873 276 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 RN7SL97P-201ENST00000486780 299 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 RN7SL604P-201ENST00000492589 296 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 MIR4301-201ENST00000577203 66 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 MIR3135A-201ENST00000578460 77 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 MIR4330-201ENST00000579077 105 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 MIR1254-2-201ENST00000579553 63 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 MIR4646-201ENST00000580775 63 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 MIR4505-201ENST00000582238 73 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 MIR6082-201ENST00000613604 109 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 LINC00901.1-201ENST00000617252 152 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 LINC02495-203ENST00000636704 242 ntBASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-11Q9BYQ6 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 SALL1P1-201ENST00000438101 3837 ntBASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-11Q9BYQ6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms