Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF223E7ERA6 SNORD115-28-201ENST00000363931 81 ntBASIC4□□□□□ -1.77
RNF223E7ERA6 Y_RNA.440-201ENST00000384120 114 ntBASIC4□□□□□ -1.77
RNF223E7ERA6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC4□□□□□ -1.77
RNF223E7ERA6 DBIP2-201ENST00000419076 262 ntBASIC4□□□□□ -1.77
RNF223E7ERA6 AL162591.2-201ENST00000449634 317 ntBASIC4□□□□□ -1.77
RNF223E7ERA6 SNRPGP3-201ENST00000469405 227 ntBASIC4□□□□□ -1.77
RNF223E7ERA6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4□□□□□ -1.77
RNF223E7ERA6 RNU6-1006P-201ENST00000516998 103 ntBASIC4□□□□□ -1.77
RNF223E7ERA6 IGLVIV-65-201ENST00000517313 360 ntBASIC4□□□□□ -1.77
RNF223E7ERA6 AC040958.1-201ENST00000561102 201 ntBASIC4□□□□□ -1.77
RNF223E7ERA6 MIR3939-201ENST00000582614 106 ntBASIC4□□□□□ -1.77
RNF223E7ERA6 MIR6716-201ENST00000613413 80 ntBASIC4□□□□□ -1.77
RNF223E7ERA6 AL022401.1-201ENST00000619498 108 ntBASIC4□□□□□ -1.77
RNF223E7ERA6 AC090517.3-201ENST00000625170 141 ntBASIC4□□□□□ -1.77
RNF223E7ERA6 MIR548BB-201ENST00000626714 66 ntBASIC4□□□□□ -1.77
RNF223E7ERA6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4□□□□□ -1.77
RNF223E7ERA6 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF223E7ERA6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
RNF223E7ERA6 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4□□□□□ -1.77
RNF223E7ERA6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF223E7ERA6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF223E7ERA6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF223E7ERA6 AC017071.1-201ENST00000564407 2204 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 AL022322.2-201ENST00000624072 20397 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF223E7ERA6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF223E7ERA6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF223E7ERA6 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RNF223E7ERA6 Y_RNA.37-201ENST00000362606 108 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 Y_RNA.94-201ENST00000363068 106 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 SNORA14A-201ENST00000364773 135 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 Y_RNA.377-201ENST00000365644 108 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 RNA5SP397-201ENST00000391323 118 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF223E7ERA6 AC233266.1-201ENST00000454518 96 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 RNA5SP310-201ENST00000459084 116 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 RNU7-80P-201ENST00000459562 61 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 AC242852.1-201ENST00000612151 96 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 uc_338.14-201ENST00000613162 166 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 AL110115.1-201ENST00000614396 364 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 AC244015.1-201ENST00000622301 99 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 AC064859.1-201ENST00000624741 174 ntBASIC3.99□□□□□ -1.77
RNF223E7ERA6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF223E7ERA6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF223E7ERA6 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF223E7ERA6 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF223E7ERA6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF223E7ERA6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF223E7ERA6 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RNF223E7ERA6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RNF223E7ERA6 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF223E7ERA6 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF223E7ERA6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF223E7ERA6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF223E7ERA6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF223E7ERA6 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF223E7ERA6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF223E7ERA6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF223E7ERA6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF223E7ERA6 SNORD116-10-201ENST00000363791 102 ntBASIC3.98□□□□□ -1.77
RNF223E7ERA6 Y_RNA.316-201ENST00000365118 111 ntBASIC3.98□□□□□ -1.77
RNF223E7ERA6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF223E7ERA6 MIR802-201ENST00000390235 94 ntBASIC3.98□□□□□ -1.77
RNF223E7ERA6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RNF223E7ERA6 RNU1-82P-201ENST00000390851 165 ntBASIC3.98□□□□□ -1.77
RNF223E7ERA6 RPS23P4-201ENST00000487908 423 ntBASIC3.98□□□□□ -1.77
RNF223E7ERA6 Y_RNA.659-201ENST00000515994 113 ntBASIC3.98□□□□□ -1.77
RNF223E7ERA6 RNU1-6P-201ENST00000516290 144 ntBASIC3.98□□□□□ -1.77
RNF223E7ERA6 Vault.1-201ENST00000516474 102 ntBASIC3.98□□□□□ -1.77
RNF223E7ERA6 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.98□□□□□ -1.77
RNF223E7ERA6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF223E7ERA6 MIR3160-1-201ENST00000577972 85 ntBASIC3.98□□□□□ -1.77
RNF223E7ERA6 AC233702.9-201ENST00000581528 203 ntBASIC3.98□□□□□ -1.77
RNF223E7ERA6 AL121932.1-201ENST00000605542 214 ntBASIC3.98□□□□□ -1.77
RNF223E7ERA6 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.98□□□□□ -1.77
RNF223E7ERA6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RNF223E7ERA6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF223E7ERA6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF223E7ERA6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
RNF223E7ERA6 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.98□□□□□ -1.77
RNF223E7ERA6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF223E7ERA6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
RNF223E7ERA6 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF223E7ERA6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF223E7ERA6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF223E7ERA6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF223E7ERA6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF223E7ERA6 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF223E7ERA6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF223E7ERA6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RNF223E7ERA6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF223E7ERA6 RNA5SP388-201ENST00000362584 119 ntBASIC3.97□□□□□ -1.77
RNF223E7ERA6 RNU6-509P-201ENST00000363519 107 ntBASIC3.97□□□□□ -1.77
RNF223E7ERA6 RNA5SP509-201ENST00000364577 119 ntBASIC3.97□□□□□ -1.77
RNF223E7ERA6 Y_RNA.351-201ENST00000365436 96 ntBASIC3.97□□□□□ -1.77
RNF223E7ERA6 Y_RNA.467-201ENST00000384297 102 ntBASIC3.97□□□□□ -1.77
RNF223E7ERA6 Y_RNA.565-201ENST00000384719 101 ntBASIC3.97□□□□□ -1.77
RNF223E7ERA6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms