Protein–RNA interactions for Protein: A6NJY4

Putative transmembrane protein LOC100289255, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A6NJY4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
A6NJY4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.54□□□□□ -1.84
A6NJY4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
A6NJY4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.54□□□□□ -1.84
A6NJY4 Y_RNA.253-201ENST00000364562 112 ntBASIC3.54□□□□□ -1.84
A6NJY4 RNA5SP485-201ENST00000365053 119 ntBASIC3.54□□□□□ -1.84
A6NJY4 Y_RNA.528-201ENST00000384575 108 ntBASIC3.54□□□□□ -1.84
A6NJY4 MIR95-201ENST00000385072 81 ntBASIC3.54□□□□□ -1.84
A6NJY4 SNORA12.1-201ENST00000390873 148 ntBASIC3.54□□□□□ -1.84
A6NJY4 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC3.54□□□□□ -1.84
A6NJY4 AC007161.1-204ENST00000423039 460 ntBASIC3.54□□□□□ -1.84
A6NJY4 CKS1BP6-201ENST00000424932 240 ntBASIC3.54□□□□□ -1.84
A6NJY4 AC083863.1-201ENST00000438811 231 ntBASIC3.54□□□□□ -1.84
A6NJY4 RN7SL329P-201ENST00000467740 299 ntBASIC3.54□□□□□ -1.84
A6NJY4 RN7SL738P-201ENST00000470264 297 ntBASIC3.54□□□□□ -1.84
A6NJY4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC3.54□□□□□ -1.84
A6NJY4 IGLVIV-65-201ENST00000517313 360 ntBASIC3.54□□□□□ -1.84
A6NJY4 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC3.54□□□□□ -1.84
A6NJY4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.54□□□□□ -1.84
A6NJY4 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC3.54□□□□□ -1.84
A6NJY4 AC010287.1-201ENST00000566916 357 ntBASIC3.54□□□□□ -1.84
A6NJY4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
A6NJY4 ZNF962P-201ENST00000443465 3140 ntBASIC3.54□□□□□ -1.84
A6NJY4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
A6NJY4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
A6NJY4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
A6NJY4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.53□□□□□ -1.84
A6NJY4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
A6NJY4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
A6NJY4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.53□□□□□ -1.84
A6NJY4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.53□□□□□ -1.84
A6NJY4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.53□□□□□ -1.84
A6NJY4 RN7SKP184-201ENST00000362348 333 ntBASIC3.53□□□□□ -1.84
A6NJY4 RNU1-23P-201ENST00000363361 144 ntBASIC3.53□□□□□ -1.84
A6NJY4 RNU1-65P-201ENST00000363919 148 ntBASIC3.53□□□□□ -1.84
A6NJY4 SNORD74.4-201ENST00000364129 80 ntBASIC3.53□□□□□ -1.84
A6NJY4 SNORA30B-201ENST00000365319 129 ntBASIC3.53□□□□□ -1.84
A6NJY4 SNORD24-201ENST00000383884 75 ntBASIC3.53□□□□□ -1.84
A6NJY4 RN7SKP220-201ENST00000410611 288 ntBASIC3.53□□□□□ -1.84
A6NJY4 SDHDP6-201ENST00000414693 480 ntBASIC3.53□□□□□ -1.84
A6NJY4 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC3.53□□□□□ -1.84
A6NJY4 CYCSP35-201ENST00000451978 304 ntBASIC3.53□□□□□ -1.84
A6NJY4 RN7SL517P-201ENST00000462240 305 ntBASIC3.53□□□□□ -1.84
A6NJY4 AC092754.1-201ENST00000472975 479 ntBASIC3.53□□□□□ -1.84
A6NJY4 RN7SL817P-201ENST00000480777 288 ntBASIC3.53□□□□□ -1.84
A6NJY4 RPL31P61-201ENST00000496160 376 ntBASIC3.53□□□□□ -1.84
A6NJY4 RNU6-1291P-201ENST00000516591 104 ntBASIC3.53□□□□□ -1.84
A6NJY4 RNU6-113P-201ENST00000516653 101 ntBASIC3.53□□□□□ -1.84
A6NJY4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
A6NJY4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.53□□□□□ -1.84
A6NJY4 MIR5582-201ENST00000579697 68 ntBASIC3.53□□□□□ -1.84
A6NJY4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.53□□□□□ -1.84
A6NJY4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
A6NJY4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
A6NJY4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
A6NJY4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
A6NJY4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.52□□□□□ -1.85
A6NJY4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.52□□□□□ -1.85
A6NJY4 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
A6NJY4 snoU2-30.2-201ENST00000362805 70 ntBASIC3.52□□□□□ -1.85
A6NJY4 RNU6-888P-201ENST00000363010 101 ntBASIC3.52□□□□□ -1.85
A6NJY4 Y_RNA.242-201ENST00000364473 110 ntBASIC3.52□□□□□ -1.85
A6NJY4 RNA5SP30-201ENST00000365552 115 ntBASIC3.52□□□□□ -1.85
A6NJY4 SNORD72-201ENST00000390994 80 ntBASIC3.52□□□□□ -1.85
A6NJY4 AC007064.1-201ENST00000412238 351 ntBASIC3.52□□□□□ -1.85
A6NJY4 TRBV29OR9-2-201ENST00000427589 333 ntBASIC3.52□□□□□ -1.85
A6NJY4 COX6CP13-201ENST00000428703 226 ntBASIC3.52□□□□□ -1.85
A6NJY4 AC009238.2-201ENST00000431026 355 ntBASIC3.52□□□□□ -1.85
A6NJY4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC3.52□□□□□ -1.85
A6NJY4 RN7SL456P-201ENST00000469290 295 ntBASIC3.52□□□□□ -1.85
A6NJY4 RPS26P28-201ENST00000470806 348 ntBASIC3.52□□□□□ -1.85
A6NJY4 RN7SL70P-201ENST00000478322 302 ntBASIC3.52□□□□□ -1.85
A6NJY4 AC011406.1-201ENST00000512440 370 ntBASIC3.52□□□□□ -1.85
A6NJY4 RNU6-537P-201ENST00000517277 103 ntBASIC3.52□□□□□ -1.85
A6NJY4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.52□□□□□ -1.85
A6NJY4 MIR744-201ENST00000578242 98 ntBASIC3.52□□□□□ -1.85
A6NJY4 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC3.52□□□□□ -1.85
A6NJY4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
A6NJY4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
A6NJY4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
A6NJY4 AC018630.2-201ENST00000534866 2403 ntBASIC3.52□□□□□ -1.85
A6NJY4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
A6NJY4 MIR340-201ENST00000362125 95 ntBASIC3.51□□□□□ -1.85
A6NJY4 Y_RNA.281-201ENST00000364774 94 ntBASIC3.51□□□□□ -1.85
A6NJY4 RNA5SP125-201ENST00000364843 120 ntBASIC3.51□□□□□ -1.85
A6NJY4 U3.32-201ENST00000408116 212 ntBASIC3.51□□□□□ -1.85
A6NJY4 RNA5SP136-201ENST00000410906 107 ntBASIC3.51□□□□□ -1.85
A6NJY4 RPL18AP14-201ENST00000417685 526 ntBASIC3.51□□□□□ -1.85
A6NJY4 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC3.51□□□□□ -1.85
A6NJY4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC3.51□□□□□ -1.85
A6NJY4 PPIAP32-201ENST00000449940 472 ntBASIC3.51□□□□□ -1.85
A6NJY4 AC106707.2-201ENST00000484182 374 ntBASIC3.51□□□□□ -1.85
A6NJY4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC3.51□□□□□ -1.85
A6NJY4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.51□□□□□ -1.85
A6NJY4 RNU6-693P-201ENST00000516134 107 ntBASIC3.51□□□□□ -1.85
A6NJY4 Y_RNA.666-201ENST00000516187 112 ntBASIC3.51□□□□□ -1.85
A6NJY4 Y_RNA.677-201ENST00000516401 85 ntBASIC3.51□□□□□ -1.85
A6NJY4 RNU6-1149P-201ENST00000516810 97 ntBASIC3.51□□□□□ -1.85
A6NJY4 SNORA48.11-201ENST00000517015 89 ntBASIC3.51□□□□□ -1.85
A6NJY4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms