Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 AC093908.1-201ENST00000623125 8092 ntBASIC3.83□□□□□ -1.8
HDLBPQ00341 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.82□□□□□ -1.8
HDLBPQ00341 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.82□□□□□ -1.8
HDLBPQ00341 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HDLBPQ00341 Y_RNA.210-201ENST00000364161 110 ntBASIC3.82□□□□□ -1.8
HDLBPQ00341 SNORA68.1-201ENST00000364537 132 ntBASIC3.82□□□□□ -1.8
HDLBPQ00341 RNU6-713P-201ENST00000384761 107 ntBASIC3.82□□□□□ -1.8
HDLBPQ00341 Y_RNA.574-201ENST00000384766 95 ntBASIC3.82□□□□□ -1.8
HDLBPQ00341 RN7SKP220-201ENST00000410611 288 ntBASIC3.82□□□□□ -1.8
HDLBPQ00341 WARS2P1-201ENST00000429678 537 ntBASIC3.82□□□□□ -1.8
HDLBPQ00341 AC112220.1-201ENST00000434628 355 ntBASIC3.82□□□□□ -1.8
HDLBPQ00341 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.82□□□□□ -1.8
HDLBPQ00341 AC107083.1-201ENST00000439643 279 ntBASIC3.82□□□□□ -1.8
HDLBPQ00341 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.82□□□□□ -1.8
HDLBPQ00341 AC145146.1-201ENST00000496370 254 ntBASIC3.82□□□□□ -1.8
HDLBPQ00341 RN7SKP49-201ENST00000516675 260 ntBASIC3.82□□□□□ -1.8
HDLBPQ00341 SCARNA3-201ENST00000517097 143 ntBASIC3.82□□□□□ -1.8
HDLBPQ00341 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.82□□□□□ -1.8
HDLBPQ00341 AC093023.1-201ENST00000547375 507 ntBASIC3.82□□□□□ -1.8
HDLBPQ00341 UBL5P2-201ENST00000583788 219 ntBASIC3.82□□□□□ -1.8
HDLBPQ00341 RPL17P51-201ENST00000605218 238 ntBASIC3.82□□□□□ -1.8
HDLBPQ00341 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HDLBPQ00341 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HDLBPQ00341 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.82□□□□□ -1.8
HDLBPQ00341 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HDLBPQ00341 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HDLBPQ00341 AL355596.1-201ENST00000565399 3996 ntBASIC3.81□□□□□ -1.8
HDLBPQ00341 RNU4-15P-201ENST00000362613 141 ntBASIC3.81□□□□□ -1.8
HDLBPQ00341 Y_RNA.47-201ENST00000362697 108 ntBASIC3.81□□□□□ -1.8
HDLBPQ00341 RNU6-1109P-201ENST00000391187 107 ntBASIC3.81□□□□□ -1.8
HDLBPQ00341 U6atac.2-201ENST00000408644 118 ntBASIC3.81□□□□□ -1.8
HDLBPQ00341 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.81□□□□□ -1.8
HDLBPQ00341 BX679664.1-201ENST00000434429 253 ntBASIC3.81□□□□□ -1.8
HDLBPQ00341 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.81□□□□□ -1.8
HDLBPQ00341 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.81□□□□□ -1.8
HDLBPQ00341 U8.22-201ENST00000459141 133 ntBASIC3.81□□□□□ -1.8
HDLBPQ00341 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.81□□□□□ -1.8
HDLBPQ00341 AC022080.3-201ENST00000544433 482 ntBASIC3.81□□□□□ -1.8
HDLBPQ00341 MIR4513-201ENST00000581077 86 ntBASIC3.81□□□□□ -1.8
HDLBPQ00341 AC010205.1-201ENST00000616668 449 ntBASIC3.81□□□□□ -1.8
HDLBPQ00341 AC006386.2-201ENST00000624491 75 ntBASIC3.81□□□□□ -1.8
HDLBPQ00341 AC012005.1-201ENST00000624575 75 ntBASIC3.81□□□□□ -1.8
HDLBPQ00341 U6.92-201ENST00000636464 89 ntBASIC3.81□□□□□ -1.8
HDLBPQ00341 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HDLBPQ00341 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HDLBPQ00341 AC092435.3-201ENST00000565538 3654 ntBASIC3.81□□□□□ -1.8
HDLBPQ00341 FAM35CP-201ENST00000554755 2470 ntBASIC3.8□□□□□ -1.8
HDLBPQ00341 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HDLBPQ00341 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.8□□□□□ -1.8
HDLBPQ00341 RNU6-281P-201ENST00000384212 103 ntBASIC3.8□□□□□ -1.8
HDLBPQ00341 RNU6-611P-201ENST00000384276 104 ntBASIC3.8□□□□□ -1.8
HDLBPQ00341 Y_RNA.556-201ENST00000384677 113 ntBASIC3.8□□□□□ -1.8
HDLBPQ00341 RNA5SP213-201ENST00000391031 106 ntBASIC3.8□□□□□ -1.8
HDLBPQ00341 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.8□□□□□ -1.8
HDLBPQ00341 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.8□□□□□ -1.8
HDLBPQ00341 RPEP5-201ENST00000441137 268 ntBASIC3.8□□□□□ -1.8
HDLBPQ00341 AC073901.1-201ENST00000462471 408 ntBASIC3.8□□□□□ -1.8
HDLBPQ00341 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.8□□□□□ -1.8
HDLBPQ00341 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.8□□□□□ -1.8
HDLBPQ00341 AL033523.1-201ENST00000605153 153 ntBASIC3.8□□□□□ -1.8
HDLBPQ00341 AC004832.5-201ENST00000608677 401 ntBASIC3.8□□□□□ -1.8
HDLBPQ00341 uc_338.25-201ENST00000613756 156 ntBASIC3.8□□□□□ -1.8
HDLBPQ00341 MIR6852-201ENST00000621699 66 ntBASIC3.8□□□□□ -1.8
HDLBPQ00341 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
HDLBPQ00341 ZNF204P-201ENST00000416749 2397 ntBASIC3.8□□□□□ -1.8
HDLBPQ00341 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HDLBPQ00341 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.79□□□□□ -1.8
HDLBPQ00341 snoU2_19.1-201ENST00000362361 80 ntBASIC3.79□□□□□ -1.8
HDLBPQ00341 RNU6-873P-201ENST00000363833 107 ntBASIC3.79□□□□□ -1.8
HDLBPQ00341 SNORD21-201ENST00000383953 95 ntBASIC3.79□□□□□ -1.8
HDLBPQ00341 Y_RNA.439-201ENST00000384119 94 ntBASIC3.79□□□□□ -1.8
HDLBPQ00341 RNU6-378P-201ENST00000384324 107 ntBASIC3.79□□□□□ -1.8
HDLBPQ00341 RPS12P18-201ENST00000442381 270 ntBASIC3.79□□□□□ -1.8
HDLBPQ00341 AC010401.1-201ENST00000463867 348 ntBASIC3.79□□□□□ -1.8
HDLBPQ00341 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.79□□□□□ -1.8
HDLBPQ00341 AC067942.3-201ENST00000512025 362 ntBASIC3.79□□□□□ -1.8
HDLBPQ00341 RNU6-1012P-201ENST00000516606 109 ntBASIC3.79□□□□□ -1.8
HDLBPQ00341 UBL5P4-201ENST00000562584 236 ntBASIC3.79□□□□□ -1.8
HDLBPQ00341 AC010620.2-201ENST00000600135 313 ntBASIC3.79□□□□□ -1.8
HDLBPQ00341 U6.104-201ENST00000637979 90 ntBASIC3.79□□□□□ -1.8
HDLBPQ00341 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HDLBPQ00341 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.78□□□□□ -1.8
HDLBPQ00341 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HDLBPQ00341 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HDLBPQ00341 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.78□□□□□ -1.8
HDLBPQ00341 Y_RNA.183-201ENST00000363882 113 ntBASIC3.78□□□□□ -1.8
HDLBPQ00341 SNORA54-201ENST00000384281 123 ntBASIC3.78□□□□□ -1.8
HDLBPQ00341 Y_RNA.500-201ENST00000384466 111 ntBASIC3.78□□□□□ -1.8
HDLBPQ00341 SNORD15B-201ENST00000384714 146 ntBASIC3.78□□□□□ -1.8
HDLBPQ00341 SNORA46.1-201ENST00000391069 153 ntBASIC3.78□□□□□ -1.8
HDLBPQ00341 MRPL35P1-201ENST00000404272 572 ntBASIC3.78□□□□□ -1.8
HDLBPQ00341 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.78□□□□□ -1.8
HDLBPQ00341 CST9LP2-201ENST00000437612 320 ntBASIC3.78□□□□□ -1.8
HDLBPQ00341 AL731563.1-201ENST00000442202 214 ntBASIC3.78□□□□□ -1.8
HDLBPQ00341 SNORA25.14-201ENST00000516481 132 ntBASIC3.78□□□□□ -1.8
HDLBPQ00341 RN7SKP282-201ENST00000516824 299 ntBASIC3.78□□□□□ -1.8
HDLBPQ00341 MIR2276-201ENST00000516886 89 ntBASIC3.78□□□□□ -1.8
HDLBPQ00341 TGIF1P1-201ENST00000558095 802 ntBASIC3.78□□□□□ -1.8
HDLBPQ00341 AC090517.1-201ENST00000569307 266 ntBASIC3.78□□□□□ -1.8
HDLBPQ00341 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms