Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXB3P14651 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXB3P14651 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXB3P14651 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXB3P14651 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXB3P14651 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXB3P14651 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
HOXB3P14651 SNORD58A-201ENST00000383875 65 ntBASIC4.82□□□□□ -1.64
HOXB3P14651 Y_RNA.467-201ENST00000384297 102 ntBASIC4.82□□□□□ -1.64
HOXB3P14651 RPS29P9-201ENST00000440360 171 ntBASIC4.82□□□□□ -1.64
HOXB3P14651 HMGN1P7-201ENST00000491722 313 ntBASIC4.82□□□□□ -1.64
HOXB3P14651 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXB3P14651 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXB3P14651 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXB3P14651 AL359075.3-201ENST00000613288 217 ntBASIC4.82□□□□□ -1.64
HOXB3P14651 AC064859.1-201ENST00000624741 174 ntBASIC4.82□□□□□ -1.64
HOXB3P14651 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXB3P14651 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXB3P14651 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXB3P14651 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HOXB3P14651 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXB3P14651 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HOXB3P14651 AC091564.4-201ENST00000533934 2194 ntBASIC4.81□□□□□ -1.64
HOXB3P14651 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXB3P14651 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXB3P14651 AC009487.4-201ENST00000624969 3585 ntBASIC4.81□□□□□ -1.64
HOXB3P14651 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXB3P14651 RN7SKP156-201ENST00000410308 342 ntBASIC4.81□□□□□ -1.64
HOXB3P14651 COX5BP7-201ENST00000414780 274 ntBASIC4.81□□□□□ -1.64
HOXB3P14651 AL691482.1-201ENST00000453255 87 ntBASIC4.81□□□□□ -1.64
HOXB3P14651 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXB3P14651 RN7SL703P-201ENST00000578485 302 ntBASIC4.81□□□□□ -1.64
HOXB3P14651 MIR4439-201ENST00000583746 80 ntBASIC4.81□□□□□ -1.64
HOXB3P14651 AC012493.2-201ENST00000595083 291 ntBASIC4.81□□□□□ -1.64
HOXB3P14651 AC096577.2-201ENST00000611455 153 ntBASIC4.81□□□□□ -1.64
HOXB3P14651 FAS-AS1.1-201ENST00000615327 126 ntBASIC4.81□□□□□ -1.64
HOXB3P14651 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXB3P14651 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HOXB3P14651 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXB3P14651 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
HOXB3P14651 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXB3P14651 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXB3P14651 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXB3P14651 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXB3P14651 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
HOXB3P14651 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXB3P14651 snoU2_19.1-201ENST00000362361 80 ntBASIC4.8□□□□□ -1.64
HOXB3P14651 MIR1271-201ENST00000408537 86 ntBASIC4.8□□□□□ -1.64
HOXB3P14651 Y_RNA.621-201ENST00000411065 96 ntBASIC4.8□□□□□ -1.64
HOXB3P14651 AL513477.1-202ENST00000417061 214 ntBASIC4.8□□□□□ -1.64
HOXB3P14651 TOMM22P1-201ENST00000418578 312 ntBASIC4.8□□□□□ -1.64
HOXB3P14651 AL049873.1-201ENST00000480540 376 ntBASIC4.8□□□□□ -1.64
HOXB3P14651 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.8□□□□□ -1.64
HOXB3P14651 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXB3P14651 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXB3P14651 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXB3P14651 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXB3P14651 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXB3P14651 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXB3P14651 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXB3P14651 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXB3P14651 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXB3P14651 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXB3P14651 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXB3P14651 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXB3P14651 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXB3P14651 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HOXB3P14651 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXB3P14651 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXB3P14651 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXB3P14651 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXB3P14651 RNU6-987P-201ENST00000384759 104 ntBASIC4.79□□□□□ -1.64
HOXB3P14651 MIR554-201ENST00000384874 96 ntBASIC4.79□□□□□ -1.64
HOXB3P14651 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HOXB3P14651 MIR298-201ENST00000401212 88 ntBASIC4.79□□□□□ -1.64
HOXB3P14651 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXB3P14651 COX6CP13-201ENST00000428703 226 ntBASIC4.79□□□□□ -1.64
HOXB3P14651 AL450023.3-201ENST00000440592 271 ntBASIC4.79□□□□□ -1.64
HOXB3P14651 RPS17P2-201ENST00000461663 408 ntBASIC4.79□□□□□ -1.64
HOXB3P14651 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXB3P14651 RNU6-539P-201ENST00000516665 103 ntBASIC4.79□□□□□ -1.64
HOXB3P14651 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXB3P14651 AC087685.1-201ENST00000587507 141 ntBASIC4.79□□□□□ -1.64
HOXB3P14651 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXB3P14651 AC096720.1-201ENST00000604441 183 ntBASIC4.79□□□□□ -1.64
HOXB3P14651 Y_RNA.773-201ENST00000607168 90 ntBASIC4.79□□□□□ -1.64
HOXB3P14651 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXB3P14651 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXB3P14651 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HOXB3P14651 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXB3P14651 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXB3P14651 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
HOXB3P14651 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXB3P14651 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXB3P14651 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXB3P14651 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXB3P14651 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXB3P14651 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXB3P14651 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXB3P14651 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms