Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.14□□□□□ -2.23
HMCN1Q96RW7 AL645944.1-201ENST00000603857 493 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC1.14□□□□□ -2.23
HMCN1Q96RW7 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.14□□□□□ -2.23
HMCN1Q96RW7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.14□□□□□ -2.23
HMCN1Q96RW7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.14□□□□□ -2.23
HMCN1Q96RW7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC1.14□□□□□ -2.23
HMCN1Q96RW7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 GVINP1-202ENST00000531871 7271 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.233-201ENST00000364407 101 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.335-201ENST00000365299 96 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.416-201ENST00000384014 113 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.467-201ENST00000384297 102 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AL035079.1-201ENST00000405210 287 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 MTHFD2P2-201ENST00000407725 247 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 CYCSP33-201ENST00000414485 327 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 SEPT7P4-201ENST00000437076 306 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AC083863.1-201ENST00000438811 231 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AC006011.1-201ENST00000442758 349 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 HMGN2P26-201ENST00000463169 339 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.681-201ENST00000516445 113 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RNU6-840P-201ENST00000517275 65 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AL137161.1-201ENST00000532231 390 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 H3F3AP1-201ENST00000559984 334 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 HMGB1P33-201ENST00000563485 527 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AC073648.5-201ENST00000603502 305 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 U7.2-201ENST00000607576 63 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.142-201ENST00000363491 102 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.153-201ENST00000363615 91 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RNU6-522P-201ENST00000364497 107 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RNA5-8SP4-201ENST00000365096 150 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.517-201ENST00000384551 106 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 MIR660-201ENST00000385235 97 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RNU6-460P-201ENST00000391158 108 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RN7SKP200-201ENST00000410564 320 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RNU2-38P-201ENST00000410856 79 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 C1DP1-201ENST00000426049 402 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RPS15AP9-201ENST00000439856 381 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RPL23AP58-201ENST00000440453 469 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AC009238.1-201ENST00000442165 424 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AC009237.6-201ENST00000446969 424 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RPL23AP67-201ENST00000465341 474 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AC087385.1-201ENST00000475062 312 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AC110794.1-201ENST00000505816 425 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AC008526.1-201ENST00000509149 338 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RNU6-1334P-201ENST00000516032 105 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 SNORD116-25-201ENST00000516517 92 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AP001189.2-201ENST00000527320 189 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AC069240.1-201ENST00000548774 375 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AC006362.1-201ENST00000567392 174 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AP000770.2-201ENST00000623694 100 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 SNORA25.7-201ENST00000364375 127 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RNA5SP37-201ENST00000365420 130 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RNU6-1335P-201ENST00000365426 107 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.435-201ENST00000384095 112 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RNU6-16P-201ENST00000384385 107 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 SNORA40B-201ENST00000385573 128 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 SKP1P3-201ENST00000429280 487 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 UBE2V2P1-201ENST00000434717 398 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RPS27P29-201ENST00000463110 252 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 SNORD116-26-201ENST00000516006 96 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 SNORA25.12-201ENST00000516202 82 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RN7SKP49-201ENST00000516675 260 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms