Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MS4A3Q96HJ5 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 MIR323A-201ENST00000362199 86 ntBASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 RNU6-624P-201ENST00000363411 107 ntBASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 snoU2-30.1-201ENST00000365012 70 ntBASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 AL009179.1-201ENST00000406085 265 ntBASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 CHEK2P5-201ENST00000423877 246 ntBASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 PPIAP20-201ENST00000449839 135 ntBASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 RNU6-634P-201ENST00000459134 106 ntBASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 MIR1273E-201ENST00000581165 102 ntBASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 AL691477.1-201ENST00000624398 162 ntBASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.85□□□□□ -1.63
MS4A3Q96HJ5 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 Y_RNA.336-201ENST00000365307 109 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 RNU6-649P-201ENST00000384463 107 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 U8.11-201ENST00000384699 133 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 HMGN2P8-201ENST00000391458 268 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 PTMAP3-201ENST00000447474 330 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 AL450471.1-201ENST00000447509 127 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 snoU13.28-201ENST00000459235 104 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 U8.18-201ENST00000459285 133 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 RN7SL583P-201ENST00000475692 287 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 RNA5SP33-201ENST00000516687 98 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 RNU6-1258P-201ENST00000516911 111 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 RNU7-128P-201ENST00000517247 62 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 MIR4762-201ENST00000585261 75 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 MIR6729-201ENST00000618194 65 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 AC063976.2-201ENST00000425667 3556 ntBASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MS4A3Q96HJ5 LINC01963-201ENST00000562038 3148 ntBASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 RNU6-1084P-201ENST00000362498 107 ntBASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 RNA5SP223-201ENST00000365174 120 ntBASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 RNA5SP104-201ENST00000410989 118 ntBASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 AL139247.1-201ENST00000422768 325 ntBASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 HMGN2P34-201ENST00000437647 269 ntBASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 AL049830.1-201ENST00000468034 425 ntBASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 RPL7AP6-201ENST00000477943 801 ntBASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 RN7SL466P-201ENST00000497546 295 ntBASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 RNA5SP362-201ENST00000516048 118 ntBASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 RNU6-557P-201ENST00000516842 110 ntBASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 ZNF861P-201ENST00000588126 639 ntBASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 AC011445.2-201ENST00000599274 173 ntBASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 MIR6862-1-201ENST00000613016 70 ntBASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 MIR6862-2-201ENST00000614755 70 ntBASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
MS4A3Q96HJ5 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 OR51H2P-202ENST00000641424 3046 ntBASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 U8.5-201ENST00000364528 136 ntBASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 Y_RNA.470-201ENST00000384307 117 ntBASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 MIR1236-201ENST00000408340 102 ntBASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 RPL23AP93-201ENST00000440847 484 ntBASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 RN7SL177P-201ENST00000476596 299 ntBASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 AC073073.1-201ENST00000493920 463 ntBASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 AC122688.1-201ENST00000541494 223 ntBASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 AC012616.1-201ENST00000600294 197 ntBASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 AL049767.1-202ENST00000637826 242 ntBASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
MS4A3Q96HJ5 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms