Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLCA3PQ9Y6N3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCA3PQ9Y6N3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCA3PQ9Y6N3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCA3PQ9Y6N3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCA3PQ9Y6N3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCA3PQ9Y6N3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCA3PQ9Y6N3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCA3PQ9Y6N3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCA3PQ9Y6N3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCA3PQ9Y6N3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLCA3PQ9Y6N3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 LETM1P2-201ENST00000597330 2178 ntBASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 AC097488.1-201ENST00000507834 756 ntBASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 SLC25A1P4-201ENST00000567977 778 ntBASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 AP000692.2-201ENST00000608391 879 ntBASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 AC120498.9-201ENST00000339021 3867 ntBASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLCA3PQ9Y6N3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 TSPY15P-201ENST00000457163 923 ntBASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 BX088651.1-201ENST00000540551 451 ntBASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 AP000525.1-201ENST00000608286 694 ntBASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCA3PQ9Y6N3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 MIR1238-201ENST00000408483 83 ntBASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 AC008040.2-201ENST00000461049 708 ntBASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 AC093484.2-201ENST00000580996 2166 ntBASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCA3PQ9Y6N3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.89■□□□□ 0.46
CLCA3PQ9Y6N3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 AC079598.2-202ENST00000546624 1451 ntBASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms