Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HRH3Q9Y5N1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HRH3Q9Y5N1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HRH3Q9Y5N1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 KRT8P11-201ENST00000409686 1436 ntBASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 AL137013.1-201ENST00000432946 1228 ntBASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HRH3Q9Y5N1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 TSPY23P-201ENST00000440136 739 ntBASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 ECEL1P2-202ENST00000465689 757 ntBASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 AP000692.2-201ENST00000608391 879 ntBASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HRH3Q9Y5N1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 AC097488.1-201ENST00000507834 756 ntBASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 AP005242.2-201ENST00000580065 1175 ntBASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 AL590326.2-201ENST00000625139 305 ntBASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
HRH3Q9Y5N1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms