Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHAC2Q9Y5I4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHAC2Q9Y5I4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHAC2Q9Y5I4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHAC2Q9Y5I4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHAC2Q9Y5I4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHAC2Q9Y5I4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHAC2Q9Y5I4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHAC2Q9Y5I4 FDX1P1-201ENST00000449115 551 ntBASIC22.55■■□□□ 1.2
PCDHAC2Q9Y5I4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHAC2Q9Y5I4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
PCDHAC2Q9Y5I4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHAC2Q9Y5I4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHAC2Q9Y5I4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHAC2Q9Y5I4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 AC008556.1-201ENST00000610908 2040 ntBASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 MIR3917-201ENST00000580971 93 ntBASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 AL136038.4-201ENST00000603606 1261 ntBASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 AC112497.1-201ENST00000624824 639 ntBASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHAC2Q9Y5I4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 TEX21P-204ENST00000641479 1693 ntBASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 AL732292.2-201ENST00000609649 430 ntBASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 TREX1-205ENST00000625293 1783 ntBASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHAC2Q9Y5I4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 KRT8P26-201ENST00000534154 1276 ntBASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHAC2Q9Y5I4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC22.52■■□□□ 1.19
PCDHAC2Q9Y5I4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
PCDHAC2Q9Y5I4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
PCDHAC2Q9Y5I4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 Z82202.1-201ENST00000623446 1880 ntBASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms