Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 TREX1-205ENST00000625293 1783 ntBASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 AC005786.4-201ENST00000623369 682 ntBASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 AC010947.1-201ENST00000623454 693 ntBASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA4Q9Y5G9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 KRT8P8-201ENST00000434750 1448 ntBASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 AC073508.3-201ENST00000619697 1419 ntBASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 SLC25A3P1-201ENST00000443844 931 ntBASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 CR392000.1-201ENST00000624770 1228 ntBASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA4Q9Y5G9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 KSR1P1-201ENST00000446298 240 ntBASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 AC116562.2-201ENST00000507042 360 ntBASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 C1QL1P1-201ENST00000568105 661 ntBASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA4Q9Y5G9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 AL133373.2-201ENST00000623187 2828 ntBASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 NIFKP9-201ENST00000419265 221 ntBASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 DUX4L26-201ENST00000489078 1255 ntBASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms