Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 AC097488.1-201ENST00000507834 756 ntBASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 AC096733.2-201ENST00000609937 1394 ntBASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 UNC93B2-201ENST00000285383 730 ntBASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 SLC25A1P4-201ENST00000567977 778 ntBASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
PCDHB13Q9Y5F0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB13Q9Y5F0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB13Q9Y5F0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB13Q9Y5F0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB13Q9Y5F0 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHB13Q9Y5F0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PCDHB13Q9Y5F0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHB13Q9Y5F0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.93■□□□□ 0.94
PCDHB13Q9Y5F0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHB13Q9Y5F0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB13Q9Y5F0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHB13Q9Y5F0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB13Q9Y5F0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 RBM17P1-201ENST00000453646 1190 ntBASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB13Q9Y5F0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB13Q9Y5F0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
PCDHB13Q9Y5F0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB13Q9Y5F0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB13Q9Y5F0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB13Q9Y5F0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PCDHB13Q9Y5F0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB13Q9Y5F0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB13Q9Y5F0 MFAP1P1-201ENST00000442257 1255 ntBASIC20.91■□□□□ 0.94
PCDHB13Q9Y5F0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB13Q9Y5F0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB13Q9Y5F0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHB13Q9Y5F0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
PCDHB13Q9Y5F0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms