Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 C2orf69P4-201ENST00000565394 541 ntBASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 CYP2T3P-201ENST00000601990 817 ntBASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 AC083906.6-201ENST00000641366 219 ntBASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 AC008764.6-201ENST00000595909 2069 ntBASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.5■□□□□ 0.07
RCL1Q9Y2P8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms