Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PCED1CP-201ENST00000419887 785 ntBASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 AL671277.2-201ENST00000458060 996 ntBASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 AL441883.1-201ENST00000566170 1045 ntBASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 AL691432.2-201ENST00000607222 2038 ntBASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 KRT8P45-201ENST00000414328 1447 ntBASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 FAM86EP-206ENST00000510506 987 ntBASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SSX2IPQ9Y2D8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 IER3-202ENST00000376377 1350 ntBASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 AC009947.2-201ENST00000444014 672 ntBASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 AL359075.1-203ENST00000462729 1002 ntBASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 AL391422.3-201ENST00000603791 2761 ntBASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.35■□□□□ 0.85
SSX2IPQ9Y2D8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSX2IPQ9Y2D8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 AL512408.1-201ENST00000569378 2000 ntBASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms