Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 UNC93B4-201ENST00000505679 747 ntBASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 AC083906.6-201ENST00000641366 219 ntBASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2BQ9UQN3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHMP2BQ9UQN3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 POM121L13P-201ENST00000422362 380 ntBASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 HLA-A-209ENST00000638375 975 ntBASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms