Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 KRT18P21-201ENST00000515767 1272 ntBASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 C2orf69P3-201ENST00000565542 1120 ntBASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF3C4Q9UKN8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
GTF3C4Q9UKN8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
GTF3C4Q9UKN8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.39■□□□□ 0.86
GTF3C4Q9UKN8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GTF3C4Q9UKN8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 RNF165-205ENST00000588679 2904 ntBASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 KRT18P22-201ENST00000402024 1347 ntBASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GTF3C4Q9UKN8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 INGX-201ENST00000359239 846 ntBASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 FAM210CP-201ENST00000445714 574 ntBASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GTF3C4Q9UKN8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms