Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 AC092368.3-202ENST00000574180 1591 ntBASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NIPSNAP3AQ9UFN0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 TUBB8P6-201ENST00000436895 1288 ntBASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 AC091874.3-201ENST00000512672 1195 ntBASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 AC092437.1-201ENST00000624794 1048 ntBASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.11■□□□□ 0.49
NIPSNAP3AQ9UFN0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 KRT18P16-201ENST00000510337 1294 ntBASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 AC092118.2-201ENST00000613495 667 ntBASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NIPSNAP3AQ9UFN0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 AL121832.2-201ENST00000610979 668 ntBASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 IKBKGP1-201ENST00000612193 1073 ntBASIC18.09■□□□□ 0.49
NIPSNAP3AQ9UFN0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms