Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.74■□□□□ 0.59
MKS1Q9NXB0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.73■□□□□ 0.59
MKS1Q9NXB0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 GUSBP6-202ENST00000438529 1198 ntBASIC18.73■□□□□ 0.59
MKS1Q9NXB0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 C1QL1P1-201ENST00000568105 661 ntBASIC18.73■□□□□ 0.59
MKS1Q9NXB0 MIR5787-201ENST00000611784 55 ntBASIC18.73■□□□□ 0.59
MKS1Q9NXB0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.73■□□□□ 0.59
MKS1Q9NXB0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
MKS1Q9NXB0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MKS1Q9NXB0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKS1Q9NXB0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MKS1Q9NXB0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MKS1Q9NXB0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKS1Q9NXB0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MKS1Q9NXB0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKS1Q9NXB0 KRT8P41-201ENST00000533985 1514 ntBASIC18.71■□□□□ 0.59
MKS1Q9NXB0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKS1Q9NXB0 AC067852.2-201ENST00000590513 2313 ntBASIC18.71■□□□□ 0.59
MKS1Q9NXB0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKS1Q9NXB0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKS1Q9NXB0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKS1Q9NXB0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKS1Q9NXB0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MKS1Q9NXB0 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms