Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 XCL2-201ENST00000367819 565 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF216Q9NWF9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.77■■□□□ 1.08
RNF216Q9NWF9 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 AC073195.1-201ENST00000607241 877 ntBASIC21.77■■□□□ 1.08
RNF216Q9NWF9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF216Q9NWF9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.77■■□□□ 1.07
RNF216Q9NWF9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.77■■□□□ 1.07
RNF216Q9NWF9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RNF216Q9NWF9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.77■■□□□ 1.07
RNF216Q9NWF9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
RNF216Q9NWF9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 C9orf85-203ENST00000377031 1107 ntTSL 3 BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 GXYLT1P1-201ENST00000446657 490 ntBASIC21.76■■□□□ 1.07
RNF216Q9NWF9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 RNU6-415P-201ENST00000516252 97 ntBASIC21.76■■□□□ 1.07
RNF216Q9NWF9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.76■■□□□ 1.07
RNF216Q9NWF9 AL445984.1-201ENST00000637834 659 ntBASIC21.76■■□□□ 1.07
RNF216Q9NWF9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF216Q9NWF9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 AC087499.1-201ENST00000418141 1075 ntBASIC21.75■■□□□ 1.07
RNF216Q9NWF9 USP9YP28-201ENST00000435142 589 ntBASIC21.75■■□□□ 1.07
RNF216Q9NWF9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 AC018362.1-201ENST00000564805 846 ntTSL 5 BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 AC005951.1-201ENST00000576706 485 ntBASIC21.75■■□□□ 1.07
RNF216Q9NWF9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 CD177P1-201ENST00000606252 935 ntBASIC21.75■■□□□ 1.07
RNF216Q9NWF9 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 AC133561.5-201ENST00000635547 218 ntBASIC21.75■■□□□ 1.07
RNF216Q9NWF9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RNF216Q9NWF9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
RNF216Q9NWF9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF216Q9NWF9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF216Q9NWF9 KRT8P20-201ENST00000423953 1409 ntBASIC21.74■■□□□ 1.07
RNF216Q9NWF9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.74■■□□□ 1.07
RNF216Q9NWF9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms