Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.23■□□□□ 0.83
CISHQ9NSE2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.23■□□□□ 0.83
CISHQ9NSE2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CISHQ9NSE2 BX088651.1-201ENST00000540551 451 ntBASIC20.23■□□□□ 0.83
CISHQ9NSE2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.23■□□□□ 0.83
CISHQ9NSE2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CISHQ9NSE2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.23■□□□□ 0.83
CISHQ9NSE2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.23■□□□□ 0.83
CISHQ9NSE2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CISHQ9NSE2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CISHQ9NSE2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CISHQ9NSE2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CISHQ9NSE2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 MMP23A-201ENST00000234610 1017 ntBASIC20.22■□□□□ 0.83
CISHQ9NSE2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CISHQ9NSE2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.22■□□□□ 0.83
CISHQ9NSE2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 CA15P1-201ENST00000481698 905 ntBASIC20.22■□□□□ 0.83
CISHQ9NSE2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.22■□□□□ 0.83
CISHQ9NSE2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CISHQ9NSE2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.22■□□□□ 0.83
CISHQ9NSE2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.22■□□□□ 0.83
CISHQ9NSE2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CISHQ9NSE2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.22■□□□□ 0.83
CISHQ9NSE2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CISHQ9NSE2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CISHQ9NSE2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CISHQ9NSE2 AC120498.9-201ENST00000339021 3867 ntBASIC20.21■□□□□ 0.83
CISHQ9NSE2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.21■□□□□ 0.83
CISHQ9NSE2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.21■□□□□ 0.83
CISHQ9NSE2 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.21■□□□□ 0.83
CISHQ9NSE2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CISHQ9NSE2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CISHQ9NSE2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.21■□□□□ 0.83
CISHQ9NSE2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.21■□□□□ 0.83
CISHQ9NSE2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.21■□□□□ 0.83
CISHQ9NSE2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.21■□□□□ 0.83
CISHQ9NSE2 CYP2D8P-201ENST00000433633 1490 ntBASIC20.21■□□□□ 0.83
CISHQ9NSE2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CISHQ9NSE2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CISHQ9NSE2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
CISHQ9NSE2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CISHQ9NSE2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CISHQ9NSE2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CISHQ9NSE2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CISHQ9NSE2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CISHQ9NSE2 AIRN-201ENST00000601203 4374 ntBASIC20.2■□□□□ 0.82
CISHQ9NSE2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CISHQ9NSE2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.2■□□□□ 0.82
CISHQ9NSE2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.2■□□□□ 0.82
CISHQ9NSE2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CISHQ9NSE2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CISHQ9NSE2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CISHQ9NSE2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CISHQ9NSE2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CISHQ9NSE2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CISHQ9NSE2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CISHQ9NSE2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CISHQ9NSE2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CISHQ9NSE2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.2■□□□□ 0.82
CISHQ9NSE2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.2■□□□□ 0.82
CISHQ9NSE2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CISHQ9NSE2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.2■□□□□ 0.82
CISHQ9NSE2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CISHQ9NSE2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CISHQ9NSE2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CISHQ9NSE2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CISHQ9NSE2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CISHQ9NSE2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CISHQ9NSE2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CISHQ9NSE2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CISHQ9NSE2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CISHQ9NSE2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CISHQ9NSE2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CISHQ9NSE2 SLC25A1P2-201ENST00000430693 912 ntBASIC20.19■□□□□ 0.82
CISHQ9NSE2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.19■□□□□ 0.82
CISHQ9NSE2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.19■□□□□ 0.82
CISHQ9NSE2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CISHQ9NSE2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.19■□□□□ 0.82
CISHQ9NSE2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CISHQ9NSE2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CISHQ9NSE2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CISHQ9NSE2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CISHQ9NSE2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CISHQ9NSE2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CISHQ9NSE2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms