Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TLR9Q9NR96 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.1■□□□□ 0.81
TLR9Q9NR96 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TLR9Q9NR96 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TLR9Q9NR96 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TLR9Q9NR96 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TLR9Q9NR96 MCCD1P1-208ENST00000445732 328 ntBASIC20.1■□□□□ 0.81
TLR9Q9NR96 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
TLR9Q9NR96 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.1■□□□□ 0.81
TLR9Q9NR96 AC006538.3-201ENST00000612495 578 ntBASIC20.1■□□□□ 0.81
TLR9Q9NR96 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TLR9Q9NR96 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.1■□□□□ 0.81
TLR9Q9NR96 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
TLR9Q9NR96 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TLR9Q9NR96 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TLR9Q9NR96 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.1■□□□□ 0.81
TLR9Q9NR96 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TLR9Q9NR96 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TLR9Q9NR96 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TLR9Q9NR96 LINC01521-201ENST00000504184 1943 ntBASIC20.1■□□□□ 0.81
TLR9Q9NR96 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TLR9Q9NR96 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 PVRIG2P-201ENST00000435460 978 ntBASIC20.09■□□□□ 0.81
TLR9Q9NR96 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 SEC1P-202ENST00000473944 940 ntBASIC20.09■□□□□ 0.81
TLR9Q9NR96 UNC93B7-201ENST00000509439 705 ntBASIC20.09■□□□□ 0.81
TLR9Q9NR96 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.09■□□□□ 0.81
TLR9Q9NR96 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.09■□□□□ 0.81
TLR9Q9NR96 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.09■□□□□ 0.81
TLR9Q9NR96 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.09■□□□□ 0.81
TLR9Q9NR96 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.09■□□□□ 0.81
TLR9Q9NR96 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.09■□□□□ 0.81
TLR9Q9NR96 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TLR9Q9NR96 AC093525.10-201ENST00000625130 1569 ntBASIC20.08■□□□□ 0.81
TLR9Q9NR96 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TLR9Q9NR96 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TLR9Q9NR96 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TLR9Q9NR96 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TLR9Q9NR96 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TLR9Q9NR96 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.08■□□□□ 0.81
TLR9Q9NR96 CHCHD2P8-201ENST00000429873 447 ntBASIC20.08■□□□□ 0.81
TLR9Q9NR96 NUS1P1-201ENST00000446295 882 ntBASIC20.08■□□□□ 0.81
TLR9Q9NR96 KRT17P6-201ENST00000453795 1220 ntBASIC20.08■□□□□ 0.81
TLR9Q9NR96 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TLR9Q9NR96 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.08■□□□□ 0.81
TLR9Q9NR96 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TLR9Q9NR96 AC079602.3-201ENST00000623931 403 ntBASIC20.08■□□□□ 0.81
TLR9Q9NR96 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.08■□□□□ 0.81
TLR9Q9NR96 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TLR9Q9NR96 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TLR9Q9NR96 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.08■□□□□ 0.8
TLR9Q9NR96 KRT8P10-201ENST00000450021 1447 ntBASIC20.08■□□□□ 0.8
TLR9Q9NR96 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TLR9Q9NR96 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
TLR9Q9NR96 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TLR9Q9NR96 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.07■□□□□ 0.8
TLR9Q9NR96 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TLR9Q9NR96 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR9Q9NR96 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TLR9Q9NR96 SDHAP1-207ENST00000440850 2000 ntBASIC20.07■□□□□ 0.8
TLR9Q9NR96 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR9Q9NR96 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR9Q9NR96 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TLR9Q9NR96 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
TLR9Q9NR96 AP000593.1-201ENST00000393668 712 ntBASIC20.07■□□□□ 0.8
TLR9Q9NR96 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR9Q9NR96 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TLR9Q9NR96 HLA-F-220ENST00000434407 884 ntBASIC20.07■□□□□ 0.8
TLR9Q9NR96 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TLR9Q9NR96 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.07■□□□□ 0.8
TLR9Q9NR96 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.07■□□□□ 0.8
TLR9Q9NR96 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.07■□□□□ 0.8
TLR9Q9NR96 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TLR9Q9NR96 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.07■□□□□ 0.8
TLR9Q9NR96 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.07■□□□□ 0.8
TLR9Q9NR96 LINC01006-201ENST00000333319 2292 ntBASIC20.07■□□□□ 0.8
TLR9Q9NR96 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TLR9Q9NR96 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TLR9Q9NR96 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.07■□□□□ 0.8
TLR9Q9NR96 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR9Q9NR96 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR9Q9NR96 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR9Q9NR96 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.06■□□□□ 0.8
TLR9Q9NR96 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
TLR9Q9NR96 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.06■□□□□ 0.8
TLR9Q9NR96 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TLR9Q9NR96 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms