Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 AL355355.2-201ENST00000442321 338 ntBASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 MIR4785-201ENST00000585005 73 ntBASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 AC131212.4-201ENST00000623606 975 ntBASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 AC007613.1-201ENST00000572811 2597 ntBASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 NUDT16P1-203ENST00000513809 620 ntBASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 AP003071.4-201ENST00000562276 1284 ntBASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 AL031985.4-201ENST00000642138 673 ntBASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN3Q9NQS3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 TSPY15P-201ENST00000457163 923 ntBASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 AL160286.2-201ENST00000567150 934 ntBASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 KRT17P2-201ENST00000300992 1314 ntBASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.15■□□□□ 0.5
NECTIN3Q9NQS3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NECTIN3Q9NQS3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NECTIN3Q9NQS3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NECTIN3Q9NQS3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NECTIN3Q9NQS3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms