Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 KRT8P41-201ENST00000533985 1514 ntBASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 Z85996.1-201ENST00000494644 937 ntBASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 AC073648.6-201ENST00000641589 218 ntBASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NEUROD4Q9HD90 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NEUROD4Q9HD90 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.89■□□□□ 0.46
NEUROD4Q9HD90 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 NIFKP9-201ENST00000419265 221 ntBASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 UBE2SP1-201ENST00000450587 669 ntBASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 AL512353.2-201ENST00000448759 1962 ntBASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEUROD4Q9HD90 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 AL353807.1-201ENST00000427475 662 ntBASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 AC008550.1-201ENST00000511500 884 ntBASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 AL353708.3-201ENST00000610272 989 ntBASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms