Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 BCL2-203ENST00000589955 5011 ntBASIC16.91■□□□□ 0.3
NELFAQ9H3P2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NELFAQ9H3P2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NELFAQ9H3P2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.91■□□□□ 0.3
NELFAQ9H3P2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NELFAQ9H3P2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
NELFAQ9H3P2 AL161938.1-201ENST00000569833 2180 ntBASIC16.91■□□□□ 0.3
NELFAQ9H3P2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 AC011506.1-201ENST00000474329 610 ntBASIC16.9■□□□□ 0.3
NELFAQ9H3P2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 AC116562.2-201ENST00000507042 360 ntBASIC16.9■□□□□ 0.3
NELFAQ9H3P2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 MIR4785-201ENST00000585005 73 ntBASIC16.9■□□□□ 0.3
NELFAQ9H3P2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 KRT8P41-201ENST00000533985 1514 ntBASIC16.9■□□□□ 0.3
NELFAQ9H3P2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 AC098818.2-201ENST00000564925 2320 ntBASIC16.9■□□□□ 0.3
NELFAQ9H3P2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NELFAQ9H3P2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NELFAQ9H3P2 RCC2P6-201ENST00000526625 1557 ntBASIC16.89■□□□□ 0.3
NELFAQ9H3P2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
NELFAQ9H3P2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
NELFAQ9H3P2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.89■□□□□ 0.3
NELFAQ9H3P2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.89■□□□□ 0.3
NELFAQ9H3P2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NELFAQ9H3P2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 TSPY21P-201ENST00000433481 731 ntBASIC16.89■□□□□ 0.29
NELFAQ9H3P2 B3GAT3P1-201ENST00000471720 806 ntBASIC16.89■□□□□ 0.29
NELFAQ9H3P2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 AP003071.4-201ENST00000562276 1284 ntBASIC16.89■□□□□ 0.29
NELFAQ9H3P2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 REXO1L10P-201ENST00000615707 1290 ntBASIC16.89■□□□□ 0.29
NELFAQ9H3P2 REXO1L12P-201ENST00000622156 912 ntBASIC16.89■□□□□ 0.29
NELFAQ9H3P2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NELFAQ9H3P2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 FP475955.4-201ENST00000623131 1990 ntBASIC16.88■□□□□ 0.29
NELFAQ9H3P2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NELFAQ9H3P2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms