Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 AL355355.2-201ENST00000442321 338 ntBASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.22■□□□□ 0.99
CCSER1Q9C0I3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 MIR718-201ENST00000390190 70 ntBASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCSER1Q9C0I3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
CCSER1Q9C0I3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 MFAP1P1-201ENST00000442257 1255 ntBASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 ANO7L1-203ENST00000602586 1720 ntBASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CCSER1Q9C0I3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 MTMR9LP-203ENST00000426597 1545 ntBASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 AC097488.1-201ENST00000507834 756 ntBASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 AP003071.4-201ENST00000562276 1284 ntBASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 SLC25A1P4-201ENST00000567977 778 ntBASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms