Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 AC011558.1-201ENST00000623459 338 ntBASIC19.4■□□□□ 0.7
CIPCQ9C0C6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CIPCQ9C0C6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CIPCQ9C0C6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.39■□□□□ 0.7
CIPCQ9C0C6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.39■□□□□ 0.7
CIPCQ9C0C6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CIPCQ9C0C6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CIPCQ9C0C6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CIPCQ9C0C6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 AL023973.1-201ENST00000624619 620 ntBASIC19.39■□□□□ 0.69
CIPCQ9C0C6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CIPCQ9C0C6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.38■□□□□ 0.69
CIPCQ9C0C6 AL031432.5-201ENST00000641059 760 ntBASIC19.38■□□□□ 0.69
CIPCQ9C0C6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CIPCQ9C0C6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 Z82202.1-201ENST00000623446 1880 ntBASIC19.37■□□□□ 0.69
CIPCQ9C0C6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.37■□□□□ 0.69
CIPCQ9C0C6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.37■□□□□ 0.69
CIPCQ9C0C6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
CIPCQ9C0C6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CIPCQ9C0C6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms