Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 AL161938.1-201ENST00000569833 2180 ntBASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 AC007663.1-201ENST00000438948 1240 ntBASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM62Q9BVG3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 HMGA1P5-201ENST00000412453 271 ntBASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 AC012306.2-201ENST00000609350 630 ntBASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM62Q9BVG3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 AP003041.3-201ENST00000527151 707 ntBASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms