Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 AC018553.1-201ENST00000616682 1458 ntBASIC17.4■□□□□ 0.38
COPS4Q9BT78 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS4Q9BT78 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.4■□□□□ 0.38
COPS4Q9BT78 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.4■□□□□ 0.38
COPS4Q9BT78 CDCA4P2-201ENST00000441182 718 ntBASIC17.4■□□□□ 0.38
COPS4Q9BT78 AC026185.1-201ENST00000445748 174 ntBASIC17.4■□□□□ 0.38
COPS4Q9BT78 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.4■□□□□ 0.38
COPS4Q9BT78 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.4■□□□□ 0.38
COPS4Q9BT78 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.4■□□□□ 0.38
COPS4Q9BT78 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.4■□□□□ 0.38
COPS4Q9BT78 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.4■□□□□ 0.38
COPS4Q9BT78 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.4■□□□□ 0.38
COPS4Q9BT78 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COPS4Q9BT78 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS4Q9BT78 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS4Q9BT78 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS4Q9BT78 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS4Q9BT78 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS4Q9BT78 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
COPS4Q9BT78 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
COPS4Q9BT78 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COPS4Q9BT78 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.39■□□□□ 0.38
COPS4Q9BT78 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
COPS4Q9BT78 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.38
COPS4Q9BT78 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
COPS4Q9BT78 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COPS4Q9BT78 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
COPS4Q9BT78 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COPS4Q9BT78 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.39■□□□□ 0.37
COPS4Q9BT78 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS4Q9BT78 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS4Q9BT78 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COPS4Q9BT78 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.39■□□□□ 0.37
COPS4Q9BT78 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
COPS4Q9BT78 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COPS4Q9BT78 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COPS4Q9BT78 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.39■□□□□ 0.37
COPS4Q9BT78 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS4Q9BT78 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS4Q9BT78 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.39■□□□□ 0.37
COPS4Q9BT78 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.39■□□□□ 0.37
COPS4Q9BT78 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
COPS4Q9BT78 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COPS4Q9BT78 AC023632.3-201ENST00000521633 145 ntBASIC17.39■□□□□ 0.37
COPS4Q9BT78 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.39■□□□□ 0.37
COPS4Q9BT78 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COPS4Q9BT78 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.39■□□□□ 0.37
COPS4Q9BT78 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
COPS4Q9BT78 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS4Q9BT78 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS4Q9BT78 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS4Q9BT78 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COPS4Q9BT78 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS4Q9BT78 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
COPS4Q9BT78 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS4Q9BT78 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
COPS4Q9BT78 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COPS4Q9BT78 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS4Q9BT78 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS4Q9BT78 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS4Q9BT78 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.38■□□□□ 0.37
COPS4Q9BT78 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
COPS4Q9BT78 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COPS4Q9BT78 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.38■□□□□ 0.37
COPS4Q9BT78 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS4Q9BT78 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
COPS4Q9BT78 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.38■□□□□ 0.37
COPS4Q9BT78 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.38■□□□□ 0.37
COPS4Q9BT78 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.38■□□□□ 0.37
COPS4Q9BT78 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.38■□□□□ 0.37
COPS4Q9BT78 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.38■□□□□ 0.37
COPS4Q9BT78 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.38■□□□□ 0.37
COPS4Q9BT78 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.38■□□□□ 0.37
COPS4Q9BT78 AL050303.2-201ENST00000619798 666 ntBASIC17.38■□□□□ 0.37
COPS4Q9BT78 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS4Q9BT78 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS4Q9BT78 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS4Q9BT78 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.38■□□□□ 0.37
COPS4Q9BT78 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.38■□□□□ 0.37
COPS4Q9BT78 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COPS4Q9BT78 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS4Q9BT78 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS4Q9BT78 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.37■□□□□ 0.37
COPS4Q9BT78 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COPS4Q9BT78 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COPS4Q9BT78 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS4Q9BT78 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.37■□□□□ 0.37
COPS4Q9BT78 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.37■□□□□ 0.37
COPS4Q9BT78 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COPS4Q9BT78 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS4Q9BT78 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS4Q9BT78 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS4Q9BT78 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS4Q9BT78 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS4Q9BT78 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COPS4Q9BT78 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COPS4Q9BT78 BX276092.2-201ENST00000417668 665 ntBASIC17.37■□□□□ 0.37
COPS4Q9BT78 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COPS4Q9BT78 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COPS4Q9BT78 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms