Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMOQ99835 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.9■□□□□ 0.78
SMOQ99835 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMOQ99835 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMOQ99835 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
SMOQ99835 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SMOQ99835 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.89■□□□□ 0.77
SMOQ99835 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SMOQ99835 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 CR769767.2-201ENST00000622735 460 ntBASIC19.89■□□□□ 0.77
SMOQ99835 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMOQ99835 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMOQ99835 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.88■□□□□ 0.77
SMOQ99835 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SMOQ99835 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SMOQ99835 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
SMOQ99835 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMOQ99835 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.88■□□□□ 0.77
SMOQ99835 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.88■□□□□ 0.77
SMOQ99835 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SMOQ99835 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMOQ99835 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMOQ99835 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMOQ99835 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.88■□□□□ 0.77
SMOQ99835 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMOQ99835 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMOQ99835 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMOQ99835 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.88■□□□□ 0.77
SMOQ99835 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMOQ99835 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMOQ99835 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.87■□□□□ 0.77
SMOQ99835 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.87■□□□□ 0.77
SMOQ99835 KRT8P32-201ENST00000512863 1461 ntBASIC19.87■□□□□ 0.77
SMOQ99835 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.87■□□□□ 0.77
SMOQ99835 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
SMOQ99835 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.87■□□□□ 0.77
SMOQ99835 BX664615.1-201ENST00000443558 458 ntBASIC19.87■□□□□ 0.77
SMOQ99835 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.87■□□□□ 0.77
SMOQ99835 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SMOQ99835 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.87■□□□□ 0.77
SMOQ99835 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.87■□□□□ 0.77
SMOQ99835 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.87■□□□□ 0.77
SMOQ99835 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMOQ99835 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
SMOQ99835 RCC2P3-201ENST00000418112 1537 ntBASIC19.86■□□□□ 0.77
SMOQ99835 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
SMOQ99835 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.86■□□□□ 0.77
SMOQ99835 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMOQ99835 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMOQ99835 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMOQ99835 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.86■□□□□ 0.77
SMOQ99835 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMOQ99835 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.86■□□□□ 0.77
SMOQ99835 AC117947.1-201ENST00000427448 529 ntBASIC19.86■□□□□ 0.77
SMOQ99835 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
SMOQ99835 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
SMOQ99835 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.86■□□□□ 0.77
SMOQ99835 AL512604.3-201ENST00000569583 964 ntBASIC19.86■□□□□ 0.77
SMOQ99835 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.86■□□□□ 0.77
SMOQ99835 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMOQ99835 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.86■□□□□ 0.77
SMOQ99835 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMOQ99835 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SMOQ99835 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMOQ99835 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms