Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.56■□□□□ 0.56
NPAS2Q99743 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS2Q99743 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NPAS2Q99743 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS2Q99743 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.56■□□□□ 0.56
NPAS2Q99743 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.56■□□□□ 0.56
NPAS2Q99743 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.56■□□□□ 0.56
NPAS2Q99743 UBE2SP1-201ENST00000450587 669 ntBASIC18.56■□□□□ 0.56
NPAS2Q99743 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.56■□□□□ 0.56
NPAS2Q99743 ZNF815P-204ENST00000434898 1737 ntBASIC18.56■□□□□ 0.56
NPAS2Q99743 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS2Q99743 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS2Q99743 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS2Q99743 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS2Q99743 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS2Q99743 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.56■□□□□ 0.56
NPAS2Q99743 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS2Q99743 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.56■□□□□ 0.56
NPAS2Q99743 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS2Q99743 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.55■□□□□ 0.56
NPAS2Q99743 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.55■□□□□ 0.56
NPAS2Q99743 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS2Q99743 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.55■□□□□ 0.56
NPAS2Q99743 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS2Q99743 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS2Q99743 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS2Q99743 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS2Q99743 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NPAS2Q99743 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS2Q99743 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS2Q99743 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS2Q99743 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.55■□□□□ 0.56
NPAS2Q99743 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
NPAS2Q99743 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS2Q99743 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.55■□□□□ 0.56
NPAS2Q99743 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS2Q99743 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.55■□□□□ 0.56
NPAS2Q99743 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.55■□□□□ 0.56
NPAS2Q99743 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS2Q99743 FAM197Y4-202ENST00000622692 608 ntBASIC18.55■□□□□ 0.56
NPAS2Q99743 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
NPAS2Q99743 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS2Q99743 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS2Q99743 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NPAS2Q99743 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.55■□□□□ 0.56
NPAS2Q99743 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.55■□□□□ 0.56
NPAS2Q99743 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS2Q99743 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.55■□□□□ 0.56
NPAS2Q99743 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
NPAS2Q99743 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS2Q99743 PCDHB18P-201ENST00000524813 2368 ntBASIC18.54■□□□□ 0.56
NPAS2Q99743 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS2Q99743 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.54■□□□□ 0.56
NPAS2Q99743 AC124283.5-201ENST00000624661 1809 ntBASIC18.54■□□□□ 0.56
NPAS2Q99743 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS2Q99743 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS2Q99743 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS2Q99743 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS2Q99743 AL596275.1-201ENST00000423464 877 ntBASIC18.54■□□□□ 0.56
NPAS2Q99743 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS2Q99743 AC008550.1-201ENST00000511500 884 ntBASIC18.54■□□□□ 0.56
NPAS2Q99743 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS2Q99743 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.54■□□□□ 0.56
NPAS2Q99743 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.54■□□□□ 0.56
NPAS2Q99743 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.54■□□□□ 0.56
NPAS2Q99743 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS2Q99743 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS2Q99743 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.54■□□□□ 0.56
NPAS2Q99743 AL023875.1-201ENST00000640777 796 ntBASIC18.54■□□□□ 0.56
NPAS2Q99743 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NPAS2Q99743 Z98044.1-201ENST00000632503 1764 ntBASIC18.54■□□□□ 0.56
NPAS2Q99743 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS2Q99743 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NPAS2Q99743 AC116351.2-201ENST00000606540 1585 ntBASIC18.54■□□□□ 0.56
NPAS2Q99743 AC093525.10-201ENST00000625130 1569 ntBASIC18.54■□□□□ 0.56
NPAS2Q99743 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.54■□□□□ 0.56
NPAS2Q99743 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NPAS2Q99743 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS2Q99743 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.54■□□□□ 0.56
NPAS2Q99743 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS2Q99743 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NPAS2Q99743 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NPAS2Q99743 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.53■□□□□ 0.56
NPAS2Q99743 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS2Q99743 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS2Q99743 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS2Q99743 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS2Q99743 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS2Q99743 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.53■□□□□ 0.56
NPAS2Q99743 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NPAS2Q99743 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS2Q99743 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS2Q99743 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS2Q99743 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.53■□□□□ 0.56
NPAS2Q99743 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS2Q99743 RPS2P4-201ENST00000476944 856 ntBASIC18.53■□□□□ 0.56
NPAS2Q99743 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.53■□□□□ 0.56
NPAS2Q99743 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS2Q99743 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.53■□□□□ 0.56
NPAS2Q99743 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms